Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CD007_RS07615 Genome accession   NZ_CP021903
Coordinates   1451362..1451946 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain ge28     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446362..1456946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD007_RS07585 (CD007_07585) dapD 1446550..1447260 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CD007_RS07590 (CD007_07590) dapI 1447330..1448454 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  CD007_RS07595 (CD007_07595) ykuS 1448516..1448761 (+) 246 WP_003232382.1 YkuS family protein -
  CD007_RS07600 (CD007_07600) mscT 1448798..1449601 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  CD007_RS07605 (CD007_07605) ahpA 1449838..1450380 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  CD007_RS07610 (CD007_07610) ykuV 1450450..1450896 (+) 447 WP_041850881.1 thiol-disulfide oxidoreductase YkuV -
  CD007_RS07615 (CD007_07615) rok 1451362..1451946 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  CD007_RS07620 (CD007_07620) cse15 1451987..1452952 (-) 966 WP_041850880.1 spore protein Cse15 -
  CD007_RS07625 (CD007_07625) mobA 1453089..1453688 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  CD007_RS07630 (CD007_07630) moeB 1453739..1454758 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  CD007_RS07635 (CD007_07635) glp 1454776..1456068 (+) 1293 WP_041850879.1 gephyrin-like molybdotransferase Glp -
  CD007_RS07640 (CD007_07640) mobB 1456029..1456550 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=234604 CD007_RS07615 WP_014113628.1 1451362..1451946(+) (rok) [Bacillus subtilis strain ge28]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=234604 CD007_RS07615 WP_014113628.1 1451362..1451946(+) (rok) [Bacillus subtilis strain ge28]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment