Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | CD007_RS01955 | Genome accession | NZ_CP021903 |
| Coordinates | 363598..363996 (-) | Length | 132 a.a. |
| NCBI ID | WP_021481824.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain ge28 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 358598..368996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD007_RS01925 (CD007_01925) | yckA | 359174..359854 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| CD007_RS01930 (CD007_01930) | yckB | 359864..360727 (-) | 864 | WP_080121173.1 | transporter substrate-binding domain-containing protein | - |
| CD007_RS20975 | - | 360888..361085 (+) | 198 | WP_120363256.1 | hypothetical protein | - |
| CD007_RS01940 (CD007_01940) | yckC | 361105..361560 (+) | 456 | WP_024572178.1 | RDD family protein | - |
| CD007_RS01945 (CD007_01945) | yckD | 361642..361974 (+) | 333 | WP_003246247.1 | YckD family protein | - |
| CD007_RS01950 (CD007_01950) | bglC | 362128..363561 (+) | 1434 | WP_038828490.1 | 6-phospho-beta-glucosidase | - |
| CD007_RS01955 (CD007_01955) | nin/comJ | 363598..363996 (-) | 399 | WP_021481824.1 | DNA-entry nuclease inhibitor | Regulator |
| CD007_RS01960 (CD007_01960) | nucA/comI | 364023..364472 (-) | 450 | WP_014475770.1 | DNA-entry nuclease | Machinery gene |
| CD007_RS01965 (CD007_01965) | tlpC | 364640..366361 (-) | 1722 | WP_021481821.1 | methyl-accepting chemotaxis protein TlpC | - |
| CD007_RS01970 (CD007_01970) | hxlB | 366471..367028 (-) | 558 | WP_041850679.1 | 6-phospho-3-hexuloisomerase | - |
| CD007_RS01975 (CD007_01975) | hxlA | 367034..367666 (-) | 633 | WP_041850680.1 | 3-hexulose-6-phosphate synthase | - |
| CD007_RS01980 (CD007_01980) | hxlR | 367899..368261 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14962.93 Da Isoelectric Point: 4.8991
>NTDB_id=234580 CD007_RS01955 WP_021481824.1 363598..363996(-) (nin/comJ) [Bacillus subtilis strain ge28]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=234580 CD007_RS01955 WP_021481824.1 363598..363996(-) (nin/comJ) [Bacillus subtilis strain ge28]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGTTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGTTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
99.242 |
100 |
0.992 |