Detailed information NTG0234561

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: S100333_RS18715
• Genome accession: NZ_CP021892
• Coordinates: 3516926..3517648 (-)
• Length: 240 a.a.
• NCBI ID: WP_014481051.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100333
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3511926..3522648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100333_RS18680 (S100333_03814)	fliW	3512066..3512497 (-)	432	WP_003228007.1	flagellar assembly protein FliW	-
S100333_RS18685 (S100333_03815)	yviE	3512518..3513093 (-)	576	WP_014481045.1	DUF6470 family protein	-
S100333_RS18690 (S100333_03816)	flgL	3513140..3514036 (-)	897	WP_014481046.1	flagellar hook-associated protein FlgL	-
S100333_RS18695 (S100333_03817)	flgK	3514047..3515570 (-)	1524	WP_014481047.1	flagellar hook-associated protein FlgK	-
S100333_RS18700 (S100333_03818)	flgN	3515589..3516071 (-)	483	WP_014481048.1	flagellar protein FlgN	-
S100333_RS18705 (S100333_03819)	flgM	3516087..3516353 (-)	267	WP_014481049.1	flagellar biosynthesis anti-sigma factor FlgM	-
S100333_RS18710 (S100333_03820)	yvyF	3516434..3516853 (-)	420	WP_038429728.1	TIGR03826 family flagellar region protein	-
S100333_RS18715 (S100333_03821)	comFC	3516926..3517648 (-)	723	WP_014481051.1	comF operon protein ComFC	Machinery gene
S100333_RS18720 (S100333_03822)	comFB	3517612..3517908 (-)	297	WP_003227989.1	late competence protein ComFB	-
S100333_RS18725 (S100333_03823)	comFA	3517968..3519359 (-)	1392	WP_014481052.1	ATP-dependent helicase ComFA	Machinery gene
S100333_RS18730 (S100333_03824)	fakBA	3519466..3520311 (-)	846	WP_014481053.1	DegV family protein	-
S100333_RS18735 (S100333_03825)	degU	3520409..3521098 (-)	690	WP_014481054.1	two-component system response regulator DegU	Regulator
S100333_RS18740 (S100333_03826)	degS	3521181..3522338 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 27521.79 Da
• Isoelectric Point: 9.3154

>NTDB_id=234561 S100333_RS18715 WP_014481051.1 3516926..3517648(-) (comFC) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAQLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSERIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide

• Length: 723 bp

>NTDB_id=234561 S100333_RS18715 WP_014481051.1 3516926..3517648(-) (comFC) [Bacillus subtilis subsp. subtilis strain SRCM100333]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACAGCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGCGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	99.167	100	0.992