Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | S100333_RS13525 | Genome accession | NZ_CP021892 |
| Coordinates | 2515555..2515965 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis strain SRCM100333 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2510555..2520965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S100333_RS13495 | - | 2510644..2510784 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| S100333_RS13500 (S100333_02759) | yqeF | 2511090..2511821 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| S100333_RS13505 (S100333_02760) | cwlH | 2512073..2512825 (-) | 753 | WP_088272399.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| S100333_RS13510 (S100333_02761) | yqeD | 2513012..2513638 (+) | 627 | WP_088272400.1 | TVP38/TMEM64 family protein | - |
| S100333_RS13515 (S100333_02762) | gnd | 2513656..2514549 (-) | 894 | WP_088272401.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| S100333_RS13520 (S100333_02763) | yqeB | 2514800..2515522 (+) | 723 | WP_021480070.1 | hypothetical protein | - |
| S100333_RS13525 (S100333_02764) | nucA/comI | 2515555..2515965 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| S100333_RS13530 (S100333_02765) | sigK | 2516161..2516889 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| S100333_RS22340 | - | 2516889..2516987 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| S100333_RS22850 | - | 2516984..2517196 (-) | 213 | Protein_2624 | recombinase family protein | - |
| S100333_RS13540 (S100333_02766) | fumC | 2517415..2518803 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| S100333_RS13545 (S100333_02767) | - | 2518970..2519860 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=234546 S100333_RS13525 WP_009967785.1 2515555..2515965(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=234546 S100333_RS13525 WP_009967785.1 2515555..2515965(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain SRCM100333]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |