Detailed information NTG0234525

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: S100333_RS08050
• Genome accession: NZ_CP021892
• Coordinates: 1534590..1534868 (+)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100333
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1529590..1539868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100333_RS08030 (S100333_01650)	panEB	1530777..1531688 (+)	912	WP_088272307.1	ketopantoate reductase family protein	-
S100333_RS08035 (S100333_01651)	ampS	1531722..1532954 (-)	1233	WP_003232341.1	aminopeptidase	-
S100333_RS08040 (S100333_01652)	ykpC	1533064..1533198 (-)	135	WP_003238865.1	protein YkpC	-
S100333_RS08045 (S100333_01653)	mreBH	1533299..1534306 (-)	1008	WP_026113694.1	cell shape-determining protein MreBH	-
S100333_RS08050 (S100333_01654)	abrB	1534590..1534868 (+)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
S100333_RS08055 (S100333_01655)	kinC	1535058..1536344 (+)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
S100333_RS08060 (S100333_01656)	ykqA	1536360..1537193 (+)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
S100333_RS08065 (S100333_01657)	ktrC	1537256..1537921 (+)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
S100333_RS08070 (S100333_01658)	ade	1538076..1539809 (+)	1734	WP_069837481.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=234525 S100333_RS08050 WP_003244728.1 1534590..1534868(+) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=234525 S100333_RS08050 WP_003244728.1 1534590..1534868(+) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576