Detailed information NTG0234515

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: S100333_RS06220
• Genome accession: NZ_CP021892
• Coordinates: 1200759..1201712 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100333
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1195759..1206712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100333_RS06190 (S100333_01263)	argF	1196301..1197260 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
S100333_RS06200 (S100333_01266)	yjzC	1198636..1198815 (+)	180	WP_003245356.1	YjzC family protein	-
S100333_RS06205 (S100333_01267)	yjzD	1198862..1199047 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
S100333_RS06210 (S100333_01268)	-	1199296..1200030 (+)	735	WP_014479433.1	hypothetical protein	-
S100333_RS06215 (S100333_01269)	-	1200112..1200669 (+)	558	WP_029317608.1	hypothetical protein	-
S100333_RS06220 (S100333_01270)	med	1200759..1201712 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
S100333_RS06225	comZ	1201727..1201918 (+)	192	Protein_1164	ComG operon transcriptional repressor ComZ	-
S100333_RS06230 (S100333_01272)	yjzB	1201948..1202187 (-)	240	WP_003232972.1	spore coat protein YjzB	-
S100333_RS06235 (S100333_01273)	fabH	1202352..1203290 (+)	939	WP_088272281.1	beta-ketoacyl-ACP synthase III	-
S100333_RS06240 (S100333_01274)	fabF	1203313..1204554 (+)	1242	WP_088272282.1	beta-ketoacyl-ACP synthase II	-
S100333_RS06245 (S100333_01275)	yjaZ	1204630..1205415 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
S100333_RS06250 (S100333_01276)	appD	1205606..1206592 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=234515 S100333_RS06220 WP_014476425.1 1200759..1201712(+) (med) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=234515 S100333_RS06220 WP_014476425.1 1200759..1201712(+) (med) [Bacillus subtilis subsp. subtilis strain SRCM100333]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997