Detailed information NTG0234499

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: S100333_RS00250
• Genome accession: NZ_CP021892
• Coordinates: 45663..45953 (-)
• Length: 96 a.a.
• NCBI ID: WP_003226760.1
• Uniprot ID: A0A7G9PCZ4
• Organism: Bacillus subtilis subsp. subtilis strain SRCM100333
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	44388..45538	45663..45953	flank	125

Gene organization within MGE regions

Location: 44388..45953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100333_RS00250 (S100333_00050)	abrB	45663..45953 (-)	291	WP_003226760.1	transition state genes transcriptional regulator AbrB	Regulator

Sequence

Protein

• Length: 96 a.a.
• Molecular weight: 10772.62 Da
• Isoelectric Point: 6.3482

>NTDB_id=234499 S100333_RS00250 WP_003226760.1 45663..45953(-) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK

Nucleotide

• Length: 291 bp

>NTDB_id=234499 S100333_RS00250 WP_003226760.1 45663..45953(-) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM100333]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (55-90)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (10-52)

3D structure

• AlphaFold DB: A0A7G9PCZ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	100	100	1