Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   CC204_RS08015 Genome accession   NZ_CP021874
Coordinates   1653989..1655680 (-) Length   563 a.a.
NCBI ID   WP_088269713.1    Uniprot ID   -
Organism   Enterococcus wangshanyuanii strain MN05     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1648989..1660680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CC204_RS07985 ftsL 1650018..1650419 (-) 402 WP_087641025.1 cell division protein FtsL -
  CC204_RS07990 rsmH 1650436..1651395 (-) 960 WP_162288334.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  CC204_RS07995 mraZ 1651409..1651840 (-) 432 WP_088269709.1 division/cell wall cluster transcriptional repressor MraZ -
  CC204_RS08000 - 1652151..1652522 (-) 372 WP_088269710.1 DUF3397 domain-containing protein -
  CC204_RS08005 - 1652707..1653663 (+) 957 WP_088269711.1 magnesium transporter CorA family protein -
  CC204_RS08010 - 1653735..1653848 (+) 114 WP_088269712.1 DUF4044 domain-containing protein -
  CC204_RS08015 recN 1653989..1655680 (-) 1692 WP_088269713.1 DNA repair protein RecN Machinery gene
  CC204_RS08020 - 1655698..1656147 (-) 450 WP_088269714.1 arginine repressor -
  CC204_RS08025 - 1656332..1657147 (-) 816 WP_088269715.1 TlyA family RNA methyltransferase -
  CC204_RS08030 - 1657161..1658051 (-) 891 WP_088269716.1 polyprenyl synthetase family protein -
  CC204_RS08035 - 1658051..1658290 (-) 240 WP_088269717.1 exodeoxyribonuclease VII small subunit -
  CC204_RS08040 xseA 1658292..1659638 (-) 1347 WP_088269718.1 exodeoxyribonuclease VII large subunit -
  CC204_RS08045 - 1659648..1660493 (-) 846 WP_088269719.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 563 a.a.        Molecular weight: 63933.63 Da        Isoelectric Point: 4.5262

>NTDB_id=234325 CC204_RS08015 WP_088269713.1 1653989..1655680(-) (recN) [Enterococcus wangshanyuanii strain MN05]
MLQELSVQNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGASKCVLEGLFTMPKNQELINLL
EELGIETDEDSLVIQRDISASGKNVCRVNGRIVNIANLRKVGEFLVDIHGQNEHQELMQSEKHLGMLDDFGDKELLKIKE
QYEEIYSEYRMIEKKVRSRQKNEKEFAQRMDMLQFQSDEIEAAQFVVGEEELLMEERNKLGNFQKIADALAASHEAINGE
GDSSLDKIGYAMNELSSIETLDSEYKALSETVQNSYYLLQEASGDLARHIDSLELDEDRLNEVEMRLELIRQMKRKYGES
IESILEYYHEITRELADADFLEGRTGELESLLVEKKAQVIENGLKLREIRKQVAKKLEKDILKELKELYMERTEFDIRFF
ELPDEQFTEEGLDQVEFYITTNPGEPLKPLVRVASGGELSRVMLALKTIFSKSQGITSIVFDEVDTGVSGRVAQAIADKI
HQISENSQVLCITHLPQVAAVADYQYFIEKEIIGERTETKVRRLAQKERVTEIARMLSGSEITKLTVEHAKELLNMAGKE
RSN

Nucleotide


Download         Length: 1692 bp        

>NTDB_id=234325 CC204_RS08015 WP_088269713.1 1653989..1655680(-) (recN) [Enterococcus wangshanyuanii strain MN05]
ATGCTGCAGGAGCTTTCTGTACAGAATTTTGCGATCATTTCTTCTCTACAACTGGAATTTCAAATGGGAATGACCGTTTT
AACAGGTGAAACAGGCGCAGGTAAATCGATTATTATTGATGCGATGGGCTTATTGACTGGTGGCCGCGGATCAAGTGACT
ATATTCGTCAAGGGGCATCAAAATGTGTGCTTGAAGGACTCTTTACGATGCCGAAAAATCAAGAGCTGATCAACCTATTA
GAAGAATTAGGAATCGAAACGGATGAAGATTCGCTGGTGATTCAACGAGATATTTCCGCTTCTGGAAAAAATGTTTGCCG
CGTCAATGGCCGTATCGTCAATATCGCTAATTTACGTAAAGTGGGTGAATTTCTAGTAGATATCCATGGGCAAAACGAGC
ATCAGGAATTGATGCAAAGTGAAAAGCATCTAGGGATGTTGGATGATTTCGGTGATAAAGAATTGTTGAAAATCAAAGAG
CAGTATGAGGAAATCTATTCTGAGTATCGGATGATCGAAAAGAAAGTGCGAAGCCGTCAGAAAAATGAAAAAGAATTTGC
TCAGCGCATGGATATGCTGCAGTTTCAAAGCGATGAGATCGAAGCAGCTCAATTTGTAGTAGGCGAAGAAGAGCTACTGA
TGGAAGAACGGAACAAGCTGGGGAATTTTCAAAAGATAGCAGATGCTTTAGCAGCTAGCCACGAAGCGATCAACGGTGAA
GGAGACAGCAGTCTAGATAAAATCGGGTATGCCATGAATGAACTTTCTTCTATTGAAACGCTCGATTCGGAATACAAAGC
ATTATCAGAAACCGTCCAAAATAGTTATTATCTATTACAGGAAGCTAGCGGTGATTTGGCACGGCATATCGATAGTTTAG
AACTTGATGAAGATCGCTTGAATGAAGTAGAAATGCGCCTTGAACTGATTCGTCAAATGAAAAGGAAATATGGGGAATCG
ATTGAATCGATCCTTGAGTATTACCATGAAATTACTCGCGAGCTGGCGGATGCGGATTTTCTTGAAGGACGAACTGGTGA
ATTAGAGAGTCTTTTAGTGGAAAAGAAAGCCCAAGTGATCGAAAATGGCTTGAAGCTTCGTGAGATCCGAAAACAAGTTG
CGAAAAAACTAGAAAAAGATATCTTAAAAGAATTAAAAGAATTATATATGGAAAGAACAGAATTTGATATTCGCTTTTTT
GAGTTACCGGATGAACAGTTTACAGAAGAAGGGTTGGATCAGGTTGAATTTTATATTACAACAAACCCAGGTGAACCACT
AAAACCTTTGGTCAGAGTTGCTTCTGGAGGAGAACTTTCTCGTGTGATGCTCGCTTTAAAAACGATTTTTTCAAAATCAC
AAGGGATCACGAGTATTGTTTTTGATGAAGTAGACACAGGAGTTAGTGGACGTGTAGCCCAAGCGATCGCAGATAAAATC
CATCAAATCTCTGAAAATTCTCAAGTATTATGTATCACGCATCTGCCTCAAGTTGCAGCAGTTGCCGACTATCAATATTT
TATCGAAAAAGAAATCATCGGTGAACGGACGGAGACAAAGGTACGACGTTTAGCTCAAAAAGAACGTGTAACTGAGATTG
CTCGTATGCTTTCAGGTAGTGAAATCACGAAGCTTACAGTGGAACATGCGAAAGAATTGCTGAATATGGCTGGAAAAGAA
CGTAGCAATTAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-509)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.738

100

0.506

Multiple sequence alignment