Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BB165_RS03590 Genome accession   NZ_CP021870
Coordinates   637724..638533 (+) Length   269 a.a.
NCBI ID   WP_088203031.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SG-M4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 632724..643533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB165_RS03565 (BB165_03565) - 633053..633748 (-) 696 WP_000173640.1 amino acid ABC transporter permease -
  BB165_RS03570 (BB165_03570) - 633761..634561 (-) 801 WP_000946171.1 transporter substrate-binding domain-containing protein -
  BB165_RS03575 (BB165_03575) - 634573..635328 (-) 756 WP_000053154.1 amino acid ABC transporter ATP-binding protein -
  BB165_RS03580 (BB165_03580) vicR 635668..636378 (+) 711 WP_000722052.1 response regulator YycF Regulator
  BB165_RS03585 (BB165_03585) vicK 636371..637720 (+) 1350 WP_088203030.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BB165_RS03590 (BB165_03590) vicX 637724..638533 (+) 810 WP_088203031.1 MBL fold metallo-hydrolase Regulator
  BB165_RS03595 (BB165_03595) - 638536..638904 (+) 369 WP_088203032.1 YbaN family protein -
  BB165_RS03600 (BB165_03600) rnc 639080..639766 (+) 687 WP_000661526.1 ribonuclease III -
  BB165_RS03605 (BB165_03605) smc 639774..643313 (+) 3540 WP_000478794.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30216.15 Da        Isoelectric Point: 6.0756

>NTDB_id=234278 BB165_RS03590 WP_088203031.1 637724..638533(+) (vicX) [Streptococcus agalactiae strain SG-M4]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVASLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGTTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAS
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=234278 BB165_RS03590 WP_088203031.1 637724..638533(+) (vicX) [Streptococcus agalactiae strain SG-M4]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATCGATGCTGGTTTAACAGGCAAGAAAGTGGCTAGCCTTCTTGCAGAAATTAATCGTAAGCCAGAAGATT
TAGATGCTATACTAGTTACCCACGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCTAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTACAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAAGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCCCCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment