Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BB162_RS10850 Genome accession   NZ_CP021869
Coordinates   2085708..2086481 (+) Length   257 a.a.
NCBI ID   WP_000456086.1    Uniprot ID   A0AB38VKI2
Organism   Streptococcus agalactiae strain SG-M6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2080708..2091481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB162_RS10840 (BB162_10840) rlmH 2083701..2084180 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BB162_RS10845 (BB162_10845) htrA 2084381..2085610 (+) 1230 WP_000728357.1 S1C family serine protease Regulator
  BB162_RS10850 (BB162_10850) spo0J 2085708..2086481 (+) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator
  BB162_RS10855 (BB162_10855) dnaA 2086690..2088051 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  BB162_RS10860 (BB162_10860) dnaN 2088206..2089342 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  BB162_RS10865 (BB162_10865) - 2089400..2090293 (+) 894 WP_000987442.1 diacylglycerol/lipid kinase family protein -
  BB162_RS10870 (BB162_10870) - 2090303..2090500 (+) 198 WP_000285197.1 DUF951 domain-containing protein -
  BB162_RS10875 (BB162_10875) - 2090667..2090819 (+) 153 WP_071659936.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29282.74 Da        Isoelectric Point: 9.8145

>NTDB_id=234253 BB162_RS10850 WP_000456086.1 2085708..2086481(+) (spo0J) [Streptococcus agalactiae strain SG-M6]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=234253 BB162_RS10850 WP_000456086.1 2085708..2086481(+) (spo0J) [Streptococcus agalactiae strain SG-M6]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCAATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment