Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BB159_RS02315 Genome accession   NZ_CP021868
Coordinates   388643..389368 (+) Length   241 a.a.
NCBI ID   WP_000912310.1    Uniprot ID   A0AB74H7X3
Organism   Streptococcus agalactiae strain SG-M8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 383643..394368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB159_RS02285 (BB159_02285) brpA 383976..385283 (+) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  BB159_RS02290 (BB159_02290) - 385358..386703 (+) 1346 WP_165727796.1 IS3-like element IS861 family transposase -
  BB159_RS02295 (BB159_02295) - 386782..387078 (-) 297 WP_000690175.1 hypothetical protein -
  BB159_RS02300 (BB159_02300) - 387075..387494 (-) 420 WP_000368097.1 HIT family protein -
  BB159_RS02305 (BB159_02305) - 387830..388333 (+) 504 WP_000773453.1 hypothetical protein -
  BB159_RS02310 (BB159_02310) - 388385..388571 (-) 187 Protein_371 hypothetical protein -
  BB159_RS02315 (BB159_02315) pptA 388643..389368 (+) 726 WP_000912310.1 ABC transporter ATP-binding protein Regulator
  BB159_RS02320 (BB159_02320) pptB 389370..390404 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  BB159_RS02325 (BB159_02325) ccrZ 390462..391262 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  BB159_RS02330 (BB159_02330) trmB 391252..391887 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BB159_RS02340 (BB159_02340) rimP 392377..392853 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  BB159_RS02345 (BB159_02345) nusA 392889..394040 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  BB159_RS02350 (BB159_02350) rnpM 394062..394358 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26893.30 Da        Isoelectric Point: 4.5217

>NTDB_id=234167 BB159_RS02315 WP_000912310.1 388643..389368(+) (pptA) [Streptococcus agalactiae strain SG-M8]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMERAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=234167 BB159_RS02315 WP_000912310.1 388643..389368(+) (pptA) [Streptococcus agalactiae strain SG-M8]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGAACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACGCACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768

Multiple sequence alignment