Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BB164_RS11505 Genome accession   NZ_CP021867
Coordinates   2188034..2188807 (+) Length   257 a.a.
NCBI ID   WP_000456087.1    Uniprot ID   A0AAW3HS18
Organism   Streptococcus agalactiae strain SG-M25     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2183034..2193807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB164_RS11495 (BB164_11475) rlmH 2186027..2186506 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BB164_RS11500 (BB164_11480) htrA 2186707..2187936 (+) 1230 WP_000728358.1 S1C family serine protease Regulator
  BB164_RS11505 (BB164_11485) spo0J 2188034..2188807 (+) 774 WP_000456087.1 ParB/RepB/Spo0J family partition protein Regulator
  BB164_RS11510 (BB164_11490) dnaA 2189006..2190367 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  BB164_RS11515 (BB164_11495) dnaN 2190522..2191658 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  BB164_RS11520 (BB164_11500) - 2191716..2192609 (+) 894 WP_000987446.1 diacylglycerol/lipid kinase family protein -
  BB164_RS11525 (BB164_11505) - 2192619..2192816 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  BB164_RS11530 (BB164_11510) - 2192982..2193221 (+) 240 WP_079254669.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29238.73 Da        Isoelectric Point: 9.9193

>NTDB_id=234150 BB164_RS11505 WP_000456087.1 2188034..2188807(+) (spo0J) [Streptococcus agalactiae strain SG-M25]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=234150 BB164_RS11505 WP_000456087.1 2188034..2188807(+) (spo0J) [Streptococcus agalactiae strain SG-M25]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGCCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment