Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   ACIAD_RS01365 Genome accession   NC_005966
Coordinates   289162..289488 (+) Length   108 a.a.
NCBI ID   WP_004920639.1    Uniprot ID   A0A7G2SG96
Organism   Acinetobacter baylyi ADP1     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 284162..294488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIAD_RS01340 (ACIAD0286) hemC 284761..285681 (+) 921 WP_004920652.1 hydroxymethylbilane synthase -
  ACIAD_RS01345 (ACIAD0287) - 285688..286458 (+) 771 WP_004920650.1 uroporphyrinogen-III synthase -
  ACIAD_RS01350 (ACIAD0288) - 286533..287297 (+) 765 WP_227499415.1 hypothetical protein -
  ACIAD_RS01355 (ACIAD0289) - 287313..288506 (+) 1194 WP_004920644.1 hypothetical protein -
  ACIAD_RS01360 (ACIAD0290) - 288515..288955 (+) 441 WP_004920640.1 acyl-CoA thioesterase -
  ACIAD_RS01365 (ACIAD0291) hns 289162..289488 (+) 327 WP_004920639.1 H-NS family nucleoid-associated regulatory protein Regulator
  ACIAD_RS01370 (ACIAD0292) gspN 289651..290394 (+) 744 WP_004920637.1 type II secretion system protein N -
  ACIAD_RS01375 (ACIAD0293) - 290394..291239 (+) 846 WP_004920634.1 type II secretion system protein N -
  ACIAD_RS01380 (ACIAD0294) gspD 291280..293598 (+) 2319 WP_004920631.1 type II secretion system secretin GspD -
  ACIAD_RS01385 (ACIAD0295) - 293668..294321 (+) 654 WP_004920630.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12531.18 Da        Isoelectric Point: 5.3445

>NTDB_id=23400 ACIAD_RS01365 WP_004920639.1 289162..289488(+) (hns) [Acinetobacter baylyi ADP1]
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQKRKKTTRKSVEPRYRNKHNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=23400 ACIAD_RS01365 WP_004920639.1 289162..289488(+) (hns) [Acinetobacter baylyi ADP1]
ATGAAACCAGATATTAGTGAGCTATCAGTAGAAGAGTTGAAACGTTTGCAAGAAGAAGCAGAAGCTTTAATTGCGACGAA
AAAAGATCAGGCAATTGAAGATGCGTATAATCAATTACTTGAAGTTGCAGAAAATGTAGGTTATACCGTTGAACAGCTAC
TTGAATATGGTGCTCAAAAACGTAAAAAAACAACACGTAAATCTGTTGAGCCACGTTACCGCAATAAACACAATGCTGAA
GAAACCTGGACAGGTCGTGGTAAGCAACCACGCTGGTTAGTTGCTGAACTTGAAAAAGGTGCAAAATTAGAAGATTTCCT
GATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7G2SG96

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

91.667

100

0.917


Multiple sequence alignment