Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   BB161_RS02280 Genome accession   NZ_CP021862
Coordinates   380818..381543 (+) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain CUGBS591     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 375818..386543
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB161_RS02245 (BB161_02245) tsaE 376621..377064 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  BB161_RS02250 (BB161_02250) - 377057..377578 (+) 522 WP_000043146.1 GNAT family N-acetyltransferase -
  BB161_RS02255 (BB161_02255) brpA 377587..378894 (+) 1308 WP_000708156.1 biofilm formation/cell division transcriptional regulator BrpA -
  BB161_RS02260 (BB161_02260) - 378958..379254 (-) 297 WP_000690175.1 hypothetical protein -
  BB161_RS02265 (BB161_02265) - 379251..379670 (-) 420 WP_000368097.1 HIT family protein -
  BB161_RS02270 (BB161_02270) - 380006..380509 (+) 504 WP_000773453.1 hypothetical protein -
  BB161_RS02275 (BB161_02275) - 380561..380746 (-) 186 WP_000368100.1 hypothetical protein -
  BB161_RS02280 (BB161_02280) pptA 380818..381543 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  BB161_RS02285 (BB161_02285) pptB 381545..382579 (+) 1035 WP_000732713.1 ABC transporter permease Regulator
  BB161_RS02290 (BB161_02290) ccrZ 382637..383437 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  BB161_RS02295 (BB161_02295) trmB 383427..384062 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BB161_RS02305 (BB161_02305) rimP 384552..385028 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  BB161_RS02310 (BB161_02310) nusA 385064..386215 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  BB161_RS02315 (BB161_02315) rnpM 386254..386532 (+) 279 WP_061826303.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=233854 BB161_RS02280 WP_000912307.1 380818..381543(+) (pptA) [Streptococcus agalactiae strain CUGBS591]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=233854 BB161_RS02280 WP_000912307.1 380818..381543(+) (pptA) [Streptococcus agalactiae strain CUGBS591]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAGCTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768


Multiple sequence alignment