Detailed information NTG0233718

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: C6P57_RS16140
• Genome accession: NZ_CP027430
• Coordinates: 3099700..3100932 (-)
• Length: 410 a.a.
• NCBI ID: WP_001153640.1
• Uniprot ID: Q072Q7
• Organism: Escherichia coli strain AS19-RrmA-
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3094700..3105932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6P57_RS16120 (C6P57_16120)	-	3095340..3096037 (+)	698	WP_103215986.1	IS1-like element IS1A family transposase	-
C6P57_RS16125 (C6P57_16125)	-	3096122..3096739 (+)	618	WP_072094256.1	SDR family oxidoreductase	-
C6P57_RS16130 (C6P57_16130)	-	3097313..3098452 (+)	1140	WP_000069818.1	hypothetical protein	-
C6P57_RS16135 (C6P57_16135)	-	3098487..3099446 (+)	960	WP_000991482.1	hypothetical protein	-
C6P57_RS16140 (C6P57_16140)	kpsS	3099700..3100932 (-)	1233	WP_001153640.1	capsular biosynthesis protein	Regulator
C6P57_RS16145 (C6P57_16145)	-	3100967..3102994 (-)	2028	WP_000579244.1	capsular polysaccharide biosynthesis protein	-
C6P57_RS16150 (C6P57_16150)	kdsB	3102991..3103731 (-)	741	WP_000030740.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C6P57_RS16155 (C6P57_16155)	-	3103741..3105417 (-)	1677	WP_012767757.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 49050.74 Da
• Isoelectric Point: 10.0880

>NTDB_id=233718 C6P57_RS16140 WP_001153640.1 3099700..3100932(-) (kpsS) [Escherichia coli strain AS19-RrmA-]
MQDNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLDRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYKGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD
KYFQSLSRQV

Nucleotide

• Length: 1233 bp

>NTDB_id=233718 C6P57_RS16140 WP_001153640.1 3099700..3100932(-) (kpsS) [Escherichia coli strain AS19-RrmA-]
ATGCAAGACAACGCACTAACCATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGGCCAATGGGACCCTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGACCGTAACGCTGTGAATGTTGTCTTCAACGGCGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGTTGGCTGCGAGATCTCCACCGACAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGCCCGCAATTTATAACCGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGACCCGGATTTTTATCGTAAGTTGCCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCATTTTCCCCGTGGTATGAAGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATATACGTGCACGATCTCCCAATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATAAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTGTTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT
AAATATTTTCAGAGCTTGTCGCGTCAAGTATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: Q072Q7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.646	96.585	0.383