Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CBI29_RS09140 | Genome accession | NZ_CP021782 |
| Coordinates | 1875820..1876200 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain A85 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1870820..1881200
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBI29_RS09110 (CBI29_01759) | kdsB | 1871723..1872484 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| CBI29_RS09115 (CBI29_01760) | - | 1872496..1873476 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| CBI29_RS09120 (CBI29_01761) | - | 1873488..1873829 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| CBI29_RS09125 (CBI29_01762) | - | 1873847..1874620 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| CBI29_RS09130 (CBI29_01763) | - | 1874658..1875266 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| CBI29_RS09135 (CBI29_01764) | - | 1875276..1875830 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| CBI29_RS09140 (CBI29_01765) | xcpV | 1875820..1876200 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CBI29_RS09145 (CBI29_01766) | xcpW | 1876200..1876901 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CBI29_RS09150 (CBI29_01767) | gspK | 1876901..1877860 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| CBI29_RS09155 (CBI29_01768) | - | 1878090..1878686 (+) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CBI29_RS09160 (CBI29_01769) | ung | 1878737..1879450 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| CBI29_RS09165 (CBI29_01770) | - | 1879447..1880571 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CBI29_RS09170 (CBI29_01771) | tadA | 1880578..1881081 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=233510 CBI29_RS09140 WP_000836914.1 1875820..1876200(+) (xcpV) [Acinetobacter baumannii strain A85]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=233510 CBI29_RS09140 WP_000836914.1 1875820..1876200(+) (xcpV) [Acinetobacter baumannii strain A85]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |