Detailed information NTG0023343

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: PD_RS10220
• Genome accession: NC_004556
• Coordinates: 2263218..2264828 (-)
• Length: 536 a.a.
• NCBI ID: WP_004090372.1
• Uniprot ID: -
• Organism: Xylella fastidiosa Temecula1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2258218..2269828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PD_RS10205 (PD1926)	pilA/pilAI	2258510..2258950 (+)	441	WP_004090375.1	pilin	Machinery gene
PD_RS10210 (PD1927)	pilB	2259793..2261526 (+)	1734	WP_004090374.1	type IV-A pilus assembly ATPase PilB	Machinery gene
PD_RS10215 (PD1928)	-	2261620..2263032 (-)	1413	WP_004090373.1	sigma-54-dependent transcriptional regulator	-
PD_RS10220 (PD1929)	pilS	2263218..2264828 (-)	1611	WP_004090372.1	sensor histidine kinase	Regulator
PD_RS10225 (PD1930)	sucC	2265083..2266246 (+)	1164	WP_004090371.1	ADP-forming succinate--CoA ligase subunit beta	-
PD_RS10230 (PD1931)	sucD	2266275..2267147 (+)	873	WP_004090370.1	succinate--CoA ligase subunit alpha	-
PD_RS10235 (PD1932)	-	2267505..2268125 (+)	621	WP_004090369.1	hypothetical protein	-

Sequence

Protein

• Length: 536 a.a.
• Molecular weight: 59135.47 Da
• Isoelectric Point: 6.1390

>NTDB_id=23343 PD_RS10220 WP_004090372.1 2263218..2264828(-) (pilS) [Xylella fastidiosa Temecula1]
MLFSASLIHRIEFAPQRELYFLALYRILEAGLIAALVFSPVSLLVDPESDPHLGTVVAVGYLLLATILLVWGRNERWFTP
LVFGSTVADILAATLAIHALPKASAGIAMMLLFNVAAAAILLRLRFSMILAWIAGVAMLVEYIWTVLSEGDSSRSLAELL
MFFTSYTAVAYMCHQAAQRARYSQALAEKRRAQIVNLAEINELIIRRMRTGVLVVDAANRIGLSNETAAALLGYDRQLVE
SDYDLATVAPELIMRLKCWRIGRHYEDTPLRLAPDQPEVQPRFVSLLADSGLTLIFLDDVSVVSRRAESLTLLALGRFSA
SLAHEIRNPLAAIKHASQLLEESSNLDKGDQRLLDIILKQCQRTNGIVESVLGLARRERANPENLDLVGFVSRFVDEYRQ
TLSSEYDNLEIQTLHSTVQALVDPRHLYQILAVLTHNALRYGRFPDTPAQVRIEVVYTGGSVGINVLDQGPGIPDAAVLQ
LFQPFFTTSDHGTGLGLYIARELCNANQSNLEYVAIPGGGACFRITLPGPYALIPN

Nucleotide

• Length: 1611 bp

>NTDB_id=23343 PD_RS10220 WP_004090372.1 2263218..2264828(-) (pilS) [Xylella fastidiosa Temecula1]
GTGTTGTTCAGCGCTTCGCTGATTCATCGGATCGAATTTGCCCCGCAGCGTGAACTTTATTTTCTCGCGTTGTATCGGAT
CTTGGAGGCTGGATTGATCGCGGCCCTGGTGTTCAGTCCGGTGTCGCTATTGGTGGATCCTGAGAGTGATCCACATTTGG
GCACGGTTGTCGCTGTCGGTTATTTGCTGTTGGCTACCATTTTGTTGGTCTGGGGTCGTAATGAGCGTTGGTTCACGCCA
TTAGTCTTTGGAAGTACTGTCGCCGACATTTTGGCTGCCACTCTTGCTATTCACGCTCTGCCTAAAGCCAGTGCCGGCAT
TGCGATGATGTTGTTGTTTAACGTTGCTGCCGCCGCCATCTTATTGCGGTTGCGTTTCAGCATGATCCTGGCTTGGATTG
CTGGGGTTGCGATGCTTGTGGAATACATCTGGACTGTACTCAGTGAGGGTGACTCCTCACGTTCACTGGCCGAGCTCCTT
ATGTTTTTCACCAGCTACACTGCAGTGGCGTATATGTGTCATCAGGCCGCGCAGCGGGCTAGATATAGCCAAGCTCTGGC
TGAAAAGCGCCGTGCCCAGATAGTCAACTTGGCAGAGATCAATGAGCTGATTATCCGACGTATGCGGACGGGTGTGTTGG
TGGTGGATGCTGCTAATCGAATCGGTTTGAGTAACGAAACTGCAGCTGCGTTGCTGGGATACGACAGACAATTGGTCGAG
AGTGATTACGATCTCGCTACGGTTGCTCCGGAGTTGATAATGCGTCTGAAGTGTTGGCGTATTGGTCGACACTACGAAGA
TACTCCGTTGCGATTAGCGCCTGATCAACCTGAGGTTCAGCCTCGCTTTGTGAGTTTGCTTGCCGACAGTGGATTGACAT
TAATTTTCCTTGATGATGTCAGTGTTGTTTCACGCCGTGCCGAATCGTTGACTTTGTTGGCGCTTGGACGTTTTTCAGCC
AGTTTGGCGCACGAGATTCGTAATCCTTTGGCTGCAATTAAACATGCATCGCAGCTGTTGGAAGAGTCCTCCAATCTTGA
CAAAGGCGATCAAAGGCTGTTGGACATTATTCTAAAGCAGTGCCAGCGGACCAATGGGATTGTGGAGAGCGTGCTTGGTT
TGGCAAGACGCGAACGTGCTAACCCGGAAAATTTGGATTTGGTCGGTTTTGTGTCGCGATTTGTCGATGAATACCGCCAG
ACATTGTCAAGCGAGTATGACAATCTGGAGATACAAACGTTGCACAGTACCGTGCAGGCACTGGTGGATCCACGCCACTT
GTACCAGATCCTCGCTGTCCTTACCCACAACGCATTGCGTTATGGCCGCTTTCCGGATACTCCGGCACAGGTGCGTATTG
AGGTGGTATATACCGGAGGCAGCGTGGGGATCAATGTCCTTGATCAGGGGCCTGGTATACCCGATGCGGCTGTTTTGCAG
CTTTTTCAGCCTTTTTTCACTACTTCCGACCATGGTACGGGGCTTGGTCTATATATCGCTCGTGAGCTGTGCAATGCGAA
TCAATCCAATCTTGAGTACGTGGCCATTCCAGGGGGAGGGGCTTGTTTCCGGATTACTTTGCCGGGTCCGTATGCATTGA
TTCCGAATTGA

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (314-378)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (423-528)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	37.044	97.201	0.36