Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   CCZ24_RS10800 Genome accession   NZ_CP021773
Coordinates   2082369..2083142 (-) Length   257 a.a.
NCBI ID   WP_000456086.1    Uniprot ID   A0AB38VKI2
Organism   Streptococcus agalactiae strain B105     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2077369..2088142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS10780 (CCZ24_10640) - 2078350..2078547 (-) 198 WP_000285197.1 DUF951 family protein -
  CCZ24_RS10785 (CCZ24_10645) - 2078557..2079450 (-) 894 WP_000987442.1 diacylglycerol kinase family protein -
  CCZ24_RS10790 (CCZ24_10650) dnaN 2079508..2080644 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  CCZ24_RS10795 (CCZ24_10655) dnaA 2080799..2082160 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  CCZ24_RS10800 (CCZ24_10660) spo0J 2082369..2083142 (-) 774 WP_000456086.1 ParB/RepB/Spo0J family partition protein Regulator
  CCZ24_RS10805 (CCZ24_10665) htrA 2083240..2084469 (-) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  CCZ24_RS10810 (CCZ24_10670) rlmH 2084670..2085149 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29282.74 Da        Isoelectric Point: 9.8145

>NTDB_id=233374 CCZ24_RS10800 WP_000456086.1 2082369..2083142(-) (spo0J) [Streptococcus agalactiae strain B105]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=233374 CCZ24_RS10800 WP_000456086.1 2082369..2083142(-) (spo0J) [Streptococcus agalactiae strain B105]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGTTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCAATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572


Multiple sequence alignment