Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CCZ24_RS08575 Genome accession   NZ_CP021773
Coordinates   1698733..1699458 (-) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae strain B105     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693733..1704458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCZ24_RS08540 (CCZ24_08390) - 1693744..1694040 (-) 297 WP_001140526.1 YlxR family protein -
  CCZ24_RS08545 (CCZ24_08395) nusA 1694062..1695213 (-) 1152 WP_000032295.1 transcription termination factor NusA -
  CCZ24_RS08550 (CCZ24_08400) rimP 1695249..1695725 (-) 477 WP_041971671.1 ribosome maturation factor RimP -
  CCZ24_RS08560 (CCZ24_08410) trmB 1696214..1696849 (-) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CCZ24_RS08565 (CCZ24_08415) - 1696839..1697639 (-) 801 WP_000155920.1 phosphotransferase family protein -
  CCZ24_RS08570 (CCZ24_08420) - 1697697..1698731 (-) 1035 WP_000732710.1 ABC transporter permease -
  CCZ24_RS08575 (CCZ24_08425) pptA 1698733..1699458 (-) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  CCZ24_RS08580 (CCZ24_08430) - 1699530..1699716 (+) 187 Protein_1624 hypothetical protein -
  CCZ24_RS08585 (CCZ24_08435) - 1699768..1700271 (-) 504 WP_000773459.1 hypothetical protein -
  CCZ24_RS08590 (CCZ24_08440) - 1700607..1701026 (+) 420 WP_000368099.1 HIT family protein -
  CCZ24_RS08595 (CCZ24_08445) - 1701023..1701319 (+) 297 WP_000690175.1 hypothetical protein -
  CCZ24_RS08600 (CCZ24_08450) - 1701383..1702690 (-) 1308 WP_000708161.1 LCP family protein -
  CCZ24_RS08605 (CCZ24_08455) - 1702699..1703220 (-) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  CCZ24_RS08610 (CCZ24_08460) tsaE 1703213..1703656 (-) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=233358 CCZ24_RS08575 WP_000912314.1 1698733..1699458(-) (pptA) [Streptococcus agalactiae strain B105]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=233358 CCZ24_RS08575 WP_000912314.1 1698733..1699458(-) (pptA) [Streptococcus agalactiae strain B105]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763

Multiple sequence alignment