Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CDH84_RS09715 Genome accession   NZ_CP021771
Coordinates   1881998..1882771 (+) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain B507     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1876998..1887771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDH84_RS09705 (CDH84_09590) rlmH 1879991..1880470 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CDH84_RS09710 (CDH84_09595) htrA 1880671..1881900 (+) 1230 WP_000728356.1 trypsin-like peptidase domain-containing protein Regulator
  CDH84_RS09715 (CDH84_09600) spo0J 1881998..1882771 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator
  CDH84_RS09720 (CDH84_09605) dnaA 1882980..1884341 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  CDH84_RS09725 (CDH84_09610) dnaN 1884496..1885632 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  CDH84_RS09730 (CDH84_09615) - 1885690..1886583 (+) 894 WP_000987448.1 diacylglycerol kinase family protein -
  CDH84_RS09735 (CDH84_09620) - 1886593..1886790 (+) 198 WP_000285199.1 DUF951 family protein -
  CDH84_RS09740 (CDH84_09625) - 1886992..1887108 (+) 117 WP_000369335.1 hypothetical protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=233272 CDH84_RS09715 WP_000456088.1 1881998..1882771(+) (spo0J) [Streptococcus agalactiae strain B507]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=233272 CDH84_RS09715 WP_000456088.1 1881998..1882771(+) (spo0J) [Streptococcus agalactiae strain B507]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATAATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568

Multiple sequence alignment