Detailed information NTG0232913

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CDA09_RS04090
• Genome accession: NZ_CP021731
• Coordinates: 913369..914442 (+)
• Length: 357 a.a.
• NCBI ID: WP_121427450.1
• Uniprot ID: -
• Organism: Azoarcus sp. DN11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 908369..919442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDA09_RS04065 (CDA09_04060)	-	909153..909407 (-)	255	WP_121427446.1	YfhL family 4Fe-4S dicluster ferredoxin	-
CDA09_RS04070 (CDA09_04065)	coaD	909425..909913 (-)	489	WP_121427447.1	pantetheine-phosphate adenylyltransferase	-
CDA09_RS04075 (CDA09_04070)	rsmD	909910..910449 (-)	540	WP_121427448.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CDA09_RS04080 (CDA09_04075)	-	910446..911849 (-)	1404	WP_121427449.1	pitrilysin family protein	-
CDA09_RS04085 (CDA09_04080)	-	911851..913227 (-)	1377	WP_121430726.1	pitrilysin family protein	-
CDA09_RS04090 (CDA09_04085)	pilA	913369..914442 (+)	1074	WP_121427450.1	signal recognition particle-docking protein FtsY	Machinery gene
CDA09_RS04095 (CDA09_04090)	-	914439..915101 (+)	663	WP_121427451.1	ATP-binding cassette domain-containing protein	-
CDA09_RS04100 (CDA09_04095)	ftsX	915098..916000 (+)	903	WP_121427452.1	permease-like cell division protein FtsX	-
CDA09_RS04105 (CDA09_04100)	-	916288..917418 (+)	1131	WP_121427453.1	radical SAM protein	-
CDA09_RS04110 (CDA09_04105)	-	917422..919137 (-)	1716	WP_121427454.1	PAS domain S-box protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37922.55 Da
• Isoelectric Point: 6.5132

>NTDB_id=232913 CDA09_RS04090 WP_121427450.1 913369..914442(+) (pilA) [Azoarcus sp. DN11]
MFGFLKKSPKPEPAVQPQAEVVPSATPDVPVATPAPTPAPAAEPVVKRSWTERLKAGLSRTRQQIGGGLASLFGRRKIDE
DLLEELEATLLMADCGVEATQHLLDALRKRWKRDKLETADQLQSALAEELLAVLQPLEQPLDVSGHSPYIIMIAGVNGSG
KTTSIGKLAKYFQSQGRSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQDGGDSAAVIFDAINAAKARRIDVVLADTAGR
LPTQLHLMEEIAKVRRVIAKAEPSGPHEVLLVLDANIGQNALAQVKAFDASIGVTGLVVTKLDGTAKGGVVAAIARQYPR
PLRFIGVGEGIDDLQPFNAREFVEALFEPVAGAGGAA

Nucleotide

• Length: 1074 bp

>NTDB_id=232913 CDA09_RS04090 WP_121427450.1 913369..914442(+) (pilA) [Azoarcus sp. DN11]
ATGTTTGGTTTCCTGAAGAAATCCCCCAAGCCCGAGCCGGCGGTGCAGCCGCAGGCCGAGGTCGTGCCGTCCGCGACGCC
GGACGTGCCCGTAGCAACCCCCGCGCCGACCCCTGCACCGGCCGCCGAGCCGGTGGTGAAGCGGTCCTGGACCGAGCGCC
TGAAGGCGGGCCTGTCGCGCACGCGACAGCAGATCGGCGGCGGGCTGGCGAGCCTGTTCGGTCGGCGCAAGATCGACGAG
GACCTGCTCGAGGAGCTGGAGGCGACGCTGCTGATGGCCGATTGCGGCGTGGAAGCGACGCAGCACCTGCTGGACGCGCT
GCGCAAGCGCTGGAAGCGCGACAAGCTCGAGACCGCCGACCAGCTGCAGAGCGCACTCGCGGAAGAGCTGCTGGCGGTGC
TGCAGCCGCTCGAGCAGCCGCTCGACGTGTCCGGGCATTCGCCCTACATCATCATGATCGCGGGCGTGAACGGCTCCGGC
AAGACGACCTCGATCGGCAAGCTCGCGAAGTATTTCCAGTCGCAGGGCAGGAGCGTGCTGCTCGCGGCCGGCGACACCTT
CCGCGCGGCGGCGCGCGAGCAGCTCATGACCTGGGGCGAGCGCAACAACGTCACGGTGATCGCGCAGGACGGCGGCGACT
CGGCGGCGGTGATCTTCGATGCGATCAATGCGGCCAAGGCGCGGCGCATCGACGTCGTGCTCGCGGATACCGCGGGGCGC
CTGCCGACGCAGCTCCACCTGATGGAAGAGATCGCCAAGGTGCGCCGCGTGATTGCGAAGGCCGAGCCGTCCGGGCCGCA
CGAGGTGCTGCTGGTGCTGGACGCGAACATCGGCCAGAACGCGCTCGCGCAGGTGAAGGCGTTCGATGCGTCGATCGGTG
TCACGGGGCTGGTCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGCGTCGTCGCGGCGATCGCGCGCCAGTATCCGCGC
CCGCTGCGCTTCATCGGCGTCGGCGAGGGCATCGACGACCTGCAGCCCTTCAACGCGCGCGAGTTCGTCGAGGCGCTGTT
CGAACCCGTCGCAGGAGCCGGCGGCGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (149-347)

• SRP54-type protein, helical bundle domain (SRP54_N) (65-130)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.036	84.874	0.535