Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CCD88_RS00600 | Genome accession | NZ_CP021724 |
| Coordinates | 114415..114960 (-) | Length | 181 a.a. |
| NCBI ID | WP_002214522.1 | Uniprot ID | Q7DD77 |
| Organism | Neisseria meningitidis strain 12-330 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 109415..119960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD88_RS00580 (CCD88_00620) | - | 110421..110933 (-) | 513 | WP_002219790.1 | shikimate kinase | - |
| CCD88_RS00595 (CCD88_00630) | pilQ | 112111..114396 (-) | 2286 | WP_002229865.1 | type IV pilus secretin PilQ | Machinery gene |
| CCD88_RS00600 (CCD88_00635) | pilP | 114415..114960 (-) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| CCD88_RS00605 (CCD88_00640) | - | 114978..115625 (-) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| CCD88_RS00610 (CCD88_00645) | pilN | 115626..116225 (-) | 600 | WP_002214520.1 | PilN domain-containing protein | Machinery gene |
| CCD88_RS00615 (CCD88_00650) | pilM | 116228..117343 (-) | 1116 | WP_002229867.1 | type IV pilus biogenesis protein PilM | - |
| CCD88_RS00620 (CCD88_00655) | - | 117495..119891 (+) | 2397 | WP_002219786.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20067.55 Da Isoelectric Point: 4.6512
>NTDB_id=232795 CCD88_RS00600 WP_002214522.1 114415..114960(-) (pilP) [Neisseria meningitidis strain 12-330]
MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=232795 CCD88_RS00600 WP_002214522.1 114415..114960(-) (pilP) [Neisseria meningitidis strain 12-330]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAGGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGACAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCGTCCTGAACGAGCTAATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAGGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGACAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCGTCCTGAACGAGCTAATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
100 |
100 |
1 |