Detailed information NTG0232382

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: S100141_RS16130
• Genome accession: NZ_CP021669
• Coordinates: 3001275..3002009 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain SRCM100141
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2996275..3007009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S100141_RS16095 (S100141_03258)	fliW	2996426..2996857 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
S100141_RS16100 (S100141_03259)	-	2996879..2997445 (-)	567	WP_071583860.1	DUF6470 family protein	-
S100141_RS16105 (S100141_03260)	flgL	2997495..2998406 (-)	912	WP_071583859.1	flagellar hook-associated protein FlgL	-
S100141_RS16110 (S100141_03261)	flgK	2998417..2999940 (-)	1524	WP_071583858.1	flagellar hook-associated protein FlgK	-
S100141_RS16115 (S100141_03262)	-	2999956..3000432 (-)	477	WP_003185711.1	flagellar protein FlgN	-
S100141_RS16120 (S100141_03263)	flgM	3000451..3000717 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
S100141_RS16125 (S100141_03264)	-	3000797..3001216 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
S100141_RS16130	comFC	3001275..3002009 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
S100141_RS16135 (S100141_03265)	-	3001966..3002250 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
S100141_RS16140 (S100141_03266)	comFA	3002305..3003699 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
S100141_RS16145 (S100141_03267)	-	3003820..3004662 (-)	843	WP_003185726.1	DegV family protein	-
S100141_RS16150 (S100141_03268)	degU	3004782..3005471 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
S100141_RS16155 (S100141_03269)	degS	3005553..3006710 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=232382 S100141_RS16130 WP_011198352.1 3001275..3002009(-) (comFC) [Bacillus licheniformis strain SRCM100141]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=232382 S100141_RS16130 WP_011198352.1 3001275..3002009(-) (comFC) [Bacillus licheniformis strain SRCM100141]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508