Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CCX87_RS14595 Genome accession   NZ_CP021648
Coordinates   3124948..3125346 (-) Length   132 a.a.
NCBI ID   WP_086911440.1    Uniprot ID   -
Organism   Acidovorax sp. T1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3119948..3130346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCX87_RS14580 - 3121730..3124018 (-) 2289 WP_087747417.1 methyl-accepting chemotaxis protein -
  CCX87_RS14585 - 3124040..3124567 (-) 528 WP_087747418.1 chemotaxis protein CheW -
  CCX87_RS14590 - 3124583..3124948 (-) 366 WP_087747420.1 response regulator -
  CCX87_RS14595 pilG 3124948..3125346 (-) 399 WP_086911440.1 response regulator Regulator
  CCX87_RS14600 - 3125407..3125580 (-) 174 WP_087747422.1 rubredoxin -
  CCX87_RS14605 - 3125675..3126622 (+) 948 WP_087747424.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CCX87_RS14610 hemL 3126606..3127916 (+) 1311 WP_087747427.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CCX87_RS14615 - 3128091..3129836 (+) 1746 WP_087747429.1 alkaline phosphatase D family protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14626.82 Da        Isoelectric Point: 6.9234

>NTDB_id=232256 CCX87_RS14595 WP_086911440.1 3124948..3125346(-) (pilG) [Acidovorax sp. T1]
MTTTGATFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNSQQGAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=232256 CCX87_RS14595 WP_086911440.1 3124948..3125346(-) (pilG) [Acidovorax sp. T1]
TTGACTACAACAGGCGCAACTTTCAAAGTGCTCGTGGTGGATGACAGCAATACCATTCGCCGAAGCGCCGAAATTTTTCT
CAAGCAGGGCGGGCATGAAGTCCTGCTGGCAGATGACGGCTTTGATGCCTTGGCCAAGGTGAATGACTACCAACCGCAGC
TCATTTTCTGTGACATTCTGATGCCCAAGCTTGATGGGTATCAAACTTGCGCCATCATCAAGCGCAATGCCCGTTTTGCC
GATACTCCGGTGGTCATGCTGTCGTCCAAGGACGGCGTATTTGACAAAGCGCGTGGCCGCATGGTCGGTTGCCAGGAATA
TCTCACCAAACCTTTTACCAAAGACCAGTTGTTGCAGGCGGTGCAGCAATTTGGTAATTCCCAACAAGGAGCCATGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.198

91.667

0.515

Multiple sequence alignment