Detailed information NTG0023211

Bioinformatically predicted

Overview

• Name: tfoS
• Type: Regulator
• Locus tag: VV1_RS00700
• Genome accession: NC_004459
• Coordinates: 135565..138969 (-)
• Length: 1134 a.a.
• NCBI ID: WP_043920899.1
• Uniprot ID: -
• Organism: Vibrio vulnificus CMCP6
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 130565..143969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VV1_RS00680 (VV1_0146)	-	131511..131939 (+)	429	WP_011078263.1	HIT domain-containing protein	-
VV1_RS00685 (VV1_0147)	-	132048..132278 (-)	231	WP_011078264.1	FeoC-like transcriptional regulator	-
VV1_RS00690 (VV1_0148)	feoB	132275..134551 (-)	2277	WP_011078265.1	Fe(2+) transporter permease subunit FeoB	-
VV1_RS00695 (VV1_0149)	-	134551..134778 (-)	228	WP_011078266.1	FeoA family protein	-
VV1_RS00700 (VV1_0150)	tfoS	135565..138969 (-)	3405	WP_043920899.1	AraC family transcriptional regulator	Regulator
VV1_RS00705 (VV1_0151)	znuA	139141..140016 (-)	876	WP_011078268.1	zinc ABC transporter substrate-binding protein ZnuA	-
VV1_RS00710 (VV1_0152)	znuC	140098..140883 (+)	786	WP_011078269.1	zinc ABC transporter ATP-binding protein ZnuC	-
VV1_RS00715 (VV1_0153)	znuB	140876..141661 (+)	786	WP_039553087.1	zinc ABC transporter permease subunit ZnuB	-
VV1_RS00720 (VV1_0154)	sucD	141744..142616 (-)	873	WP_011078271.1	succinate--CoA ligase subunit alpha	-
VV1_RS00725 (VV1_0155)	sucC	142616..143782 (-)	1167	WP_011078272.1	ADP-forming succinate--CoA ligase subunit beta	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 126623.22 Da
• Isoelectric Point: 5.3927

>NTDB_id=23211 VV1_RS00700 WP_043920899.1 135565..138969(-) (tfoS) [Vibrio vulnificus CMCP6]
MLRILAWLLLAGLTLPFKALALDGNSAIFYPLPGQEQGTFVAAKNLFVGGDGGLWIHDVHGKVQYFDGNTLLPKRGSLLE
YPSEQVAFHQGSFWTFVANEVFQTYPNQKRQLAFSLNPGAEIRKIGSSDGHIWVSDGINFYDYDIESKELKTYSLLSLYQ
NNQSSYVYINDAKRVLSKWVLGTTSGAYLSQGEQFTHIKASAKHFVAKLYFSPTRRELLVGTLNGAALIDILKPTQKNIM
IGESHVLSMTETNQEYWIGTEHGLYSYSFLTGQVAKVKAAGAQDVSPDNRKIYSLVNDEQGGIWVATNSGILYYSLFGRK
FERLNNITEEKASRFNGNITKIVYASDETIWFKDANNLYRAIGVNKQYSRVRLPVKVNDFALEDGNIWIASEQGLYIYDT
NQYKLRSFDLPSYLKGKEIDFVSVSPQGKVWISSGYRLAAIGVADGRFQDYGDRWIASQNLPARILGLEVDQKVPLIVRT
DHGAYVLENDKIRFERNTQSFGESVDIAEAKDGSLWFAGTHGIYRKDPTEKTLGELALPQENVKPICLVTDASGIWMVSS
IGLSFYNFDGELRKHFGSRSGIMSNEFVEGACAASFGEAQSGSVLVLGSKYGLVFADRDDLMVSKLPEPRVVISQVRIDD
QVANIGQKEWQLPELAYGSAISFGLGVMPNAYGETLYYRLNQEHWQTTEAGQVSFEHLAAGDYLLSVKTSLVAGDSVQVR
FTVLHPWYQTTMAMAIFVLLIVALGGLVVFWRSRYVSVQNRELTALVALKTNQLRHQSRVLLTSNQQLRKQIQVRNLLVD
NVARSLRQSVDALLSKPSVEPASEYQEHQMRIAMLLEELKSSPSDGTDGHLQNFNVSHIIQSVVDVWEDELNKSGVQVHI
SGESDDYRVAVGQFNLDVIFNSVFASVLKRAYRGQMLDIVIREQNDFVEVSFIDFGQPFSTSTEAEDSAGVESTKVDTAI
EKLPALVEQSGGRLSLFSSAERNKIEILWPKAVESLINDEEPSIFVDSVELSPVTEVSSEAVLSPEQLWLAKVEAMVAEH
YTNPEFGTAMAAKKLYVSERSLQRRFKSASSRTFTDYLTEVRLEKACESLLAGEKVVDVAFASGFNDPSYFSQRFKLYFG
VPPSKFASDALESE

Nucleotide

• Length: 3405 bp

>NTDB_id=23211 VV1_RS00700 WP_043920899.1 135565..138969(-) (tfoS) [Vibrio vulnificus CMCP6]
TTGCTGCGTATTCTTGCCTGGCTTCTACTCGCTGGGCTTACACTACCGTTCAAAGCGCTAGCTTTGGACGGAAACTCTGC
CATATTTTACCCACTGCCTGGACAGGAGCAGGGAACCTTTGTTGCCGCTAAAAATCTCTTTGTTGGCGGTGATGGTGGTT
TATGGATACATGACGTGCACGGCAAAGTGCAATATTTCGATGGCAATACCTTGTTGCCGAAACGTGGCAGCCTTCTAGAG
TATCCTTCCGAGCAAGTGGCCTTTCACCAAGGCAGTTTTTGGACTTTTGTCGCGAACGAAGTCTTCCAAACGTACCCCAA
TCAGAAACGTCAGTTAGCGTTTAGCTTAAACCCAGGGGCAGAAATCAGAAAAATTGGCAGCTCAGATGGCCACATTTGGG
TGAGTGATGGCATCAATTTTTATGACTACGATATTGAATCAAAAGAATTAAAAACCTATTCCTTACTCTCGTTGTATCAA
AACAATCAGAGTAGTTACGTCTACATCAATGATGCAAAGCGGGTTTTAAGCAAATGGGTACTCGGTACCACATCGGGAGC
GTACCTATCACAAGGTGAGCAATTTACCCATATCAAAGCGTCAGCGAAGCATTTCGTTGCCAAACTGTACTTTTCTCCGA
CTCGTCGTGAGTTACTGGTGGGGACGCTAAATGGCGCTGCGCTCATTGATATTTTAAAGCCGACTCAAAAAAACATCATG
ATTGGAGAGTCTCATGTGCTTTCGATGACAGAAACCAATCAAGAATATTGGATTGGCACGGAACATGGTCTGTACAGTTA
CTCGTTTTTAACTGGACAAGTGGCCAAAGTGAAAGCGGCAGGTGCGCAAGATGTCTCTCCTGATAATCGAAAAATTTACT
CGTTGGTGAATGATGAACAAGGGGGTATTTGGGTTGCGACGAACAGTGGCATTCTCTACTACTCTCTGTTTGGCCGAAAA
TTTGAACGTCTTAATAACATCACCGAAGAAAAAGCCAGCCGTTTTAATGGCAATATCACCAAAATTGTCTATGCATCAGA
TGAAACGATTTGGTTTAAAGATGCAAACAATCTTTACCGGGCCATTGGGGTTAATAAACAATACAGCCGCGTGCGTTTGC
CGGTAAAGGTGAATGACTTTGCACTTGAAGATGGCAACATCTGGATTGCTTCCGAGCAAGGTCTGTATATATACGACACG
AATCAGTACAAACTTCGATCGTTCGATTTACCAAGTTACCTTAAAGGTAAAGAGATTGATTTTGTTTCGGTCAGCCCTCA
AGGCAAGGTTTGGATAAGTTCGGGTTATCGATTAGCTGCCATTGGCGTTGCCGATGGGCGCTTCCAAGATTATGGCGATC
GGTGGATTGCCAGCCAAAATTTGCCCGCTCGAATTTTGGGTCTAGAAGTGGATCAAAAAGTCCCGTTAATCGTAAGAACC
GATCACGGGGCCTATGTGCTAGAAAACGACAAGATCCGTTTTGAGCGAAACACGCAGTCTTTTGGTGAAAGTGTCGATAT
TGCAGAAGCGAAAGATGGGTCGCTATGGTTTGCAGGGACTCACGGCATCTATCGTAAAGATCCCACAGAAAAAACGTTAG
GAGAGCTGGCACTTCCTCAGGAAAACGTGAAGCCTATTTGCTTAGTCACCGATGCTAGCGGCATTTGGATGGTGAGTTCA
ATTGGTCTCAGTTTTTACAATTTTGACGGAGAGCTGCGTAAGCACTTTGGGTCTCGTTCGGGCATTATGAGTAATGAGTT
CGTTGAAGGGGCATGTGCGGCTTCATTTGGAGAAGCGCAATCCGGCTCGGTGTTAGTACTGGGTTCAAAATATGGCCTGG
TATTTGCGGACCGTGATGACCTAATGGTATCCAAACTACCTGAACCTAGAGTGGTCATCAGCCAAGTTCGTATTGATGAT
CAGGTTGCAAATATCGGGCAAAAAGAGTGGCAATTGCCCGAGTTAGCGTATGGTTCCGCGATTAGTTTTGGCCTCGGCGT
GATGCCCAATGCTTACGGTGAAACGCTCTATTACCGTTTAAACCAGGAACACTGGCAAACCACAGAAGCAGGACAAGTCT
CTTTTGAACACCTTGCGGCAGGTGATTACCTGTTAAGTGTTAAAACCAGTCTAGTCGCAGGGGATTCCGTGCAAGTTCGC
TTTACGGTGTTACACCCGTGGTATCAAACTACGATGGCGATGGCAATTTTTGTCTTGCTTATCGTAGCGCTGGGCGGCTT
AGTTGTTTTCTGGCGTTCTCGTTACGTCAGTGTTCAAAACCGTGAGTTGACGGCACTGGTGGCATTGAAGACCAATCAAT
TGCGTCATCAGAGTCGAGTGTTGCTCACCAGTAACCAACAACTTCGTAAACAGATCCAAGTTAGAAATTTGCTGGTTGAC
AATGTTGCCCGTTCATTACGTCAAAGTGTGGATGCATTACTAAGCAAGCCATCGGTTGAACCTGCCTCAGAATATCAGGA
ACATCAAATGCGCATAGCAATGCTTTTGGAAGAGCTAAAAAGCTCGCCCAGCGATGGAACTGACGGGCATCTGCAAAACT
TTAACGTTAGCCATATCATTCAGTCGGTCGTTGACGTTTGGGAAGATGAACTCAATAAAAGCGGTGTTCAGGTGCACATT
TCTGGCGAATCGGACGACTATCGTGTCGCGGTAGGGCAATTTAATCTGGATGTCATTTTTAATAGTGTTTTTGCAAGTGT
GTTGAAACGCGCCTATCGTGGCCAAATGCTCGATATTGTGATCAGAGAGCAAAACGATTTTGTTGAAGTGTCGTTTATTG
ATTTTGGCCAGCCGTTTAGTACGAGCACGGAAGCCGAGGATAGCGCTGGTGTTGAGTCGACAAAAGTCGATACTGCAATT
GAGAAGCTACCTGCTTTAGTTGAACAAAGTGGCGGACGCTTAAGCTTGTTCAGTAGCGCTGAGCGAAACAAGATCGAAAT
ACTGTGGCCAAAAGCGGTTGAATCTCTGATAAATGATGAAGAGCCAAGCATCTTTGTTGATTCAGTCGAGCTGTCTCCAG
TTACGGAAGTCTCATCCGAAGCTGTTCTGTCGCCAGAGCAGCTATGGTTGGCGAAGGTCGAGGCTATGGTGGCAGAGCAT
TATACAAACCCAGAATTTGGCACGGCAATGGCGGCCAAAAAGCTCTATGTTTCTGAGCGCAGCTTACAGCGACGGTTTAA
ATCAGCGAGCTCTCGTACATTTACGGATTACCTCACGGAAGTACGTTTAGAAAAAGCATGCGAAAGTTTGTTGGCTGGTG
AAAAAGTGGTCGATGTGGCTTTCGCATCGGGATTTAATGATCCTTCTTACTTTAGTCAACGTTTTAAACTGTACTTTGGT
GTGCCCCCTTCAAAATTTGCCAGTGACGCTCTAGAGTCCGAATAA

Domains

Predicted by InterProScan.

• Helix-turn-helix domain (HTH_18) (1052-1126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tfoS	Vibrio cholerae O1 biovar El Tor strain E7946	39.442	100	0.399