Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CCD81_RS06235 Genome accession   NZ_CP021523
Coordinates   1092024..1092485 (+) Length   153 a.a.
NCBI ID   WP_002212941.1    Uniprot ID   A1KUS7
Organism   Neisseria meningitidis strain 98-182     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1087024..1097485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCD81_RS06210 (CCD81_06315) - 1088170..1088379 (-) 210 WP_002229659.1 4-oxalocrotonate tautomerase family protein -
  CCD81_RS06215 (CCD81_06320) - 1088724..1089530 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  CCD81_RS06220 (CCD81_06325) - 1089588..1090853 (-) 1266 WP_002229664.1 Glu/Leu/Phe/Val dehydrogenase -
  CCD81_RS06230 (CCD81_06335) - 1091260..1091967 (+) 708 WP_002229666.1 phosphoglycolate phosphatase -
  CCD81_RS06235 (CCD81_06340) recX 1092024..1092485 (+) 462 WP_002212941.1 recombination regulator RecX Regulator
  CCD81_RS06240 (CCD81_06345) - 1092559..1092720 (+) 162 WP_002235025.1 hypothetical protein -
  CCD81_RS06250 (CCD81_06355) - 1092873..1093355 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  CCD81_RS06255 (CCD81_06360) - 1093562..1094809 (-) 1248 WP_002229665.1 M23 family metallopeptidase -
  CCD81_RS06265 (CCD81_06365) surE 1095065..1095811 (-) 747 WP_002229669.1 5'/3'-nucleotidase SurE -
  CCD81_RS06270 (CCD81_06370) - 1095828..1097384 (-) 1557 WP_002229667.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17761.04 Da        Isoelectric Point: 9.9314

>NTDB_id=231836 CCD81_RS06235 WP_002212941.1 1092024..1092485(+) (recX) [Neisseria meningitidis strain 98-182]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=231836 CCD81_RS06235 WP_002212941.1 1092024..1092485(+) (recX) [Neisseria meningitidis strain 98-182]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974

Multiple sequence alignment