Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | CCD82_RS00600 | Genome accession | NZ_CP021522 |
| Coordinates | 114483..115028 (-) | Length | 181 a.a. |
| NCBI ID | WP_002214522.1 | Uniprot ID | Q7DD77 |
| Organism | Neisseria meningitidis strain 06-178 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 109483..120028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD82_RS00580 (CCD82_00620) | - | 110489..111001 (-) | 513 | WP_002219790.1 | shikimate kinase | - |
| CCD82_RS00595 (CCD82_00630) | pilQ | 112179..114464 (-) | 2286 | WP_002229865.1 | type IV pilus secretin PilQ | Machinery gene |
| CCD82_RS00600 (CCD82_00635) | pilP | 114483..115028 (-) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| CCD82_RS00605 (CCD82_00640) | - | 115046..115693 (-) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| CCD82_RS00610 (CCD82_00645) | pilN | 115694..116293 (-) | 600 | WP_002214520.1 | PilN domain-containing protein | Machinery gene |
| CCD82_RS00615 (CCD82_00650) | pilM | 116296..117411 (-) | 1116 | WP_002229867.1 | type IV pilus biogenesis protein PilM | - |
| CCD82_RS00620 (CCD82_00655) | - | 117563..119959 (+) | 2397 | WP_002219786.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20067.55 Da Isoelectric Point: 4.6512
>NTDB_id=231765 CCD82_RS00600 WP_002214522.1 114483..115028(-) (pilP) [Neisseria meningitidis strain 06-178]
MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=231765 CCD82_RS00600 WP_002214522.1 114483..115028(-) (pilP) [Neisseria meningitidis strain 06-178]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAGGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGACAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCGTCCTGAACGAGCTAATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAGGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGACAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCGTCCTGAACGAGCTAATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
100 |
100 |
1 |