Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   CCD83_RS06370 Genome accession   NZ_CP021521
Coordinates   1115266..1115727 (+) Length   153 a.a.
NCBI ID   WP_002230694.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 09-292     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1110266..1120727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCD83_RS06345 (CCD83_06360) - 1111412..1111621 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  CCD83_RS06350 (CCD83_06365) - 1111966..1112772 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  CCD83_RS06355 (CCD83_06370) - 1112830..1114095 (-) 1266 WP_002230693.1 Glu/Leu/Phe/Val dehydrogenase -
  CCD83_RS06365 (CCD83_06380) - 1114502..1115209 (+) 708 WP_002229666.1 phosphoglycolate phosphatase -
  CCD83_RS06370 (CCD83_06385) recX 1115266..1115727 (+) 462 WP_002230694.1 recombination regulator RecX Regulator
  CCD83_RS06375 (CCD83_06390) - 1115801..1115962 (+) 162 WP_002235025.1 hypothetical protein -
  CCD83_RS06385 (CCD83_06400) - 1116115..1116597 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  CCD83_RS06390 (CCD83_06405) - 1116804..1118051 (-) 1248 WP_002229665.1 M23 family metallopeptidase -
  CCD83_RS06400 (CCD83_06410) surE 1118307..1119053 (-) 747 WP_002230699.1 5'/3'-nucleotidase SurE -
  CCD83_RS06405 (CCD83_06415) - 1119070..1120626 (-) 1557 WP_002220608.1 TerC family protein -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17788.07 Da        Isoelectric Point: 9.9314

>NTDB_id=231738 CCD83_RS06370 WP_002230694.1 1115266..1115727(+) (recX) [Neisseria meningitidis strain 09-292]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSNEKQAAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=231738 CCD83_RS06370 WP_002230694.1 1115266..1115727(+) (recX) [Neisseria meningitidis strain 09-292]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAACGAAAAACAGGCCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967


Multiple sequence alignment