Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CCD85_RS00625 | Genome accession | NZ_CP021519 |
| Coordinates | 116453..117052 (-) | Length | 199 a.a. |
| NCBI ID | WP_149488389.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 11-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 111453..122052
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD85_RS00610 (CCD85_00645) | pilQ | 112938..115223 (-) | 2286 | WP_002229865.1 | type IV pilus secretin PilQ | Machinery gene |
| CCD85_RS00615 (CCD85_00650) | pilP | 115242..115787 (-) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| CCD85_RS00620 (CCD85_00655) | - | 115805..116452 (-) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| CCD85_RS00625 (CCD85_00660) | pilN | 116453..117052 (-) | 600 | WP_149488389.1 | PilN domain-containing protein | Machinery gene |
| CCD85_RS00630 (CCD85_00665) | pilM | 117055..118170 (-) | 1116 | WP_002229867.1 | type IV pilus biogenesis protein PilM | - |
| CCD85_RS00635 (CCD85_00670) | - | 118322..120718 (+) | 2397 | WP_002219786.1 | penicillin-binding protein 1A | - |
| CCD85_RS00640 (CCD85_00675) | yihA | 120839..121468 (-) | 630 | WP_002227620.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22256.49 Da Isoelectric Point: 9.7605
>NTDB_id=231620 CCD85_RS00625 WP_149488389.1 116453..117052(-) (pilN) [Neisseria meningitidis strain 11-14]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFINNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFINNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=231620 CCD85_RS00625 WP_149488389.1 116453..117052(-) (pilN) [Neisseria meningitidis strain 11-14]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCAACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCAACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
99.497 |
100 |
0.995 |