Detailed information NTG0023157

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BJE04_RS14505
• Genome accession: NC_005139
• Coordinates: 3095049..3096056 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus YJ016
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3090049..3101056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJE04_RS14485 (VV3009)	metJ	3090155..3090472 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
BJE04_RS14490 (VV3010)	-	3090559..3091836 (-)	1278	WP_011151291.1	malic enzyme-like NAD(P)-binding protein	-
BJE04_RS14495 (VV3011)	rpmE	3092114..3092335 (-)	222	WP_011151292.1	50S ribosomal protein L31	-
BJE04_RS14500 (VV3012)	priA	3092616..3094820 (+)	2205	WP_043877338.1	primosomal protein N'	-
BJE04_RS14505 (VV3013)	cytR	3095049..3096056 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
BJE04_RS14510 (VV3014)	-	3096166..3096723 (+)	558	WP_011151294.1	SPOR domain-containing protein	-
BJE04_RS14515 (VV3015)	hslV	3096876..3097430 (+)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
BJE04_RS14520 (VV3016)	hslU	3097458..3098789 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
BJE04_RS14525 (VV3017)	-	3098955..3099872 (+)	918	WP_011079330.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BJE04_RS14530 (VV3018)	rraA	3099948..3100469 (+)	522	WP_011151296.1	ribonuclease E activity regulator RraA	-
BJE04_RS14535 (VV3019)	zapB	3100691..3100933 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=23157 BJE04_RS14505 WP_011079334.1 3095049..3096056(+) (cytR) [Vibrio vulnificus YJ016]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=23157 BJE04_RS14505 WP_011079334.1 3095049..3096056(+) (cytR) [Vibrio vulnificus YJ016]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875