Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   S101441_RS06690 Genome accession   NZ_CP021507
Coordinates   1294999..1296150 (+) Length   383 a.a.
NCBI ID   WP_014479449.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1289999..1301150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS06665 (S101441_01343) yjbB 1290671..1291888 (+) 1218 WP_087614193.1 MFS transporter -
  S101441_RS06670 yjbC 1292052..1292630 (+) 579 Protein_1242 GNAT family N-acetyltransferase -
  S101441_RS06675 (S101441_01346) spx 1292811..1293206 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  S101441_RS06680 (S101441_01347) yjbE 1293249..1293905 (-) 657 WP_014479447.1 TerC family protein -
  S101441_RS22340 - 1294075..1294215 (+) 141 WP_119122854.1 hypothetical protein -
  S101441_RS06685 (S101441_01348) mecA 1294182..1294838 (+) 657 WP_014479448.1 adaptor protein MecA Regulator
  S101441_RS22345 - 1294833..1294955 (-) 123 WP_003245684.1 hypothetical protein -
  S101441_RS06690 (S101441_01349) coiA 1294999..1296150 (+) 1152 WP_014479449.1 competence protein CoiA Machinery gene
  S101441_RS06695 (S101441_01350) pepF 1296380..1298209 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  S101441_RS06700 (S101441_01351) - 1298247..1298414 (-) 168 WP_003244944.1 hypothetical protein -
  S101441_RS06710 (S101441_01352) spxH 1298729..1299628 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  S101441_RS06715 (S101441_01353) bhbI 1299625..1300023 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  S101441_RS06720 (S101441_01354) cwlQ 1300278..1301012 (-) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44861.98 Da        Isoelectric Point: 9.9417

>NTDB_id=231459 S101441_RS06690 WP_014479449.1 1294999..1296150(+) (coiA) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=231459 S101441_RS06690 WP_014479449.1 1294999..1296150(+) (coiA) [Bacillus subtilis subsp. subtilis strain SRCM101441]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

97.389

0.958


Multiple sequence alignment