Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   S101441_RS04925 Genome accession   NZ_CP021507
Coordinates   968294..969088 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 963294..974088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS04895 (S101441_00985) sxzA 964133..965164 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  S101441_RS04900 (S101441_00986) yfhB 965279..966160 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  S101441_RS04905 (S101441_00987) yfhC 966248..966832 (+) 585 WP_032723010.1 nitroreductase -
  S101441_RS04910 (S101441_00988) yfhD 966871..967062 (-) 192 WP_003233561.1 YfhD family protein -
  S101441_RS04915 (S101441_00989) yfhE 967129..967239 (-) 111 WP_003223230.1 YfhE family protein -
  S101441_RS04920 (S101441_00990) yfhF 967294..968205 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  S101441_RS04925 (S101441_00991) recX 968294..969088 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  S101441_RS04930 (S101441_00992) yfhH 969090..969403 (+) 314 Protein_914 YfhH family protein -
  S101441_RS04935 (S101441_00994) yfhI 969546..970739 (+) 1194 WP_003243500.1 MFS transporter -
  S101441_RS04940 (S101441_00995) sspK 970771..970923 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  S101441_RS04945 (S101441_00996) yfhJ 971048..971317 (+) 270 WP_003243789.1 YfhJ family protein -
  S101441_RS04950 (S101441_00997) yfhK 971462..971980 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  S101441_RS04955 (S101441_00998) spdL 972065..972397 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  S101441_RS04960 (S101441_00999) ephM 972384..973244 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=231447 S101441_RS04925 WP_014479217.1 968294..969088(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=231447 S101441_RS04925 WP_014479217.1 968294..969088(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101441]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment