Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   S101441_RS02065 Genome accession   NZ_CP021507
Coordinates   404703..405101 (-) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 399703..410101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS22295 - 400469..400666 (+) 198 WP_121509395.1 hypothetical protein -
  S101441_RS02035 (S101441_00406) yckC 400686..401140 (+) 455 Protein_352 RDD family protein -
  S101441_RS02040 (S101441_00407) yckD 401222..401554 (+) 333 WP_014478794.1 YckD family protein -
  S101441_RS02045 (S101441_00408) - 401682..402104 (+) 423 WP_014478795.1 MarR family transcriptional regulator -
  S101441_RS02050 (S101441_00409) - 402092..402412 (+) 321 WP_014478796.1 DUF3147 family protein -
  S101441_RS02055 (S101441_00410) - 402431..403160 (+) 730 Protein_356 AAA family ATPase -
  S101441_RS02060 (S101441_00412) bglC 403233..404666 (+) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  S101441_RS02065 (S101441_00413) nin/comJ 404703..405101 (-) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  S101441_RS02070 (S101441_00414) nucA/comI 405128..405577 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  S101441_RS02075 tlpC 405745..407466 (-) 1722 Protein_360 methyl-accepting chemotaxis protein TlpC -
  S101441_RS02080 (S101441_00417) hxlB 407577..408134 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  S101441_RS02085 (S101441_00418) hxlA 408140..408772 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  S101441_RS02090 (S101441_00419) hxlR 409001..409363 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=231441 S101441_RS02065 WP_014478800.1 404703..405101(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=231441 S101441_RS02065 WP_014478800.1 404703..405101(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain SRCM101441]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment