Detailed information NTG0231396

Bioinformatically predicted

Overview

• Name: spo0A
• Type: Regulator
• Locus tag: S101267_RS12485
• Genome accession: NZ_CP021505
• Coordinates: 2423054..2423854 (-)
• Length: 266 a.a.
• NCBI ID: WP_013352825.1
• Uniprot ID: A0A9P1JIH1
• Organism: Bacillus amyloliquefaciens strain SRCM101267
• Function: activation and repression of comK; repression of rok; repression of abrB (predicted from homology) Competence regulation

Genomic Context

Location: 2418054..2428854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101267_RS12460 (S101267_02499)	-	2418547..2419179 (+)	633	WP_013352819.1	helix-turn-helix domain-containing protein	-
S101267_RS21735	-	2419472..2419609 (+)	138	WP_014470646.1	hypothetical protein	-
S101267_RS12465 (S101267_02501)	-	2419703..2420821 (+)	1119	WP_038463265.1	NADH-dependent flavin oxidoreductase	-
S101267_RS12470 (S101267_02502)	-	2420948..2421160 (+)	213	WP_014470647.1	spore germination protein	-
S101267_RS12475 (S101267_02503)	-	2421285..2421497 (+)	213	WP_013352823.1	spore germination protein	-
S101267_RS12480 (S101267_02504)	alr	2421683..2422864 (+)	1182	WP_013352824.1	alanine racemase	-
S101267_RS22110 (S101267_02505)	-	2422925..2423059 (+)	135	WP_014470649.1	hypothetical protein	-
S101267_RS12485 (S101267_02506)	spo0A	2423054..2423854 (-)	801	WP_013352825.1	sporulation transcription factor Spo0A	Regulator
S101267_RS12490 (S101267_02507)	spoIVB	2424135..2425415 (-)	1281	WP_014470651.1	SpoIVB peptidase	-
S101267_RS12495 (S101267_02508)	recN	2425579..2427309 (-)	1731	WP_013352827.1	DNA repair protein RecN	Machinery gene
S101267_RS12500 (S101267_02509)	ahrC	2427341..2427790 (-)	450	WP_013352828.1	transcriptional regulator AhrC/ArgR	-
S101267_RS12505 (S101267_02510)	-	2427887..2428732 (-)	846	WP_013352829.1	TlyA family RNA methyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29572.07 Da
• Isoelectric Point: 6.3903

>NTDB_id=231396 S101267_RS12485 WP_013352825.1 2423054..2423854(-) (spo0A) [Bacillus amyloliquefaciens strain SRCM101267]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVLGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELAKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide

• Length: 801 bp

>NTDB_id=231396 S101267_RS12485 WP_013352825.1 2423054..2423854(-) (spo0A) [Bacillus amyloliquefaciens strain SRCM101267]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGCTCGGCGTTGCTTATAACGGACAGGAATGCCTTTCTTTGTTTAAAGATAAAAATCCCGATGTGCTCG
TTTTAGACATTATTATGCCGCATCTGGACGGTCTTGCGGTTTTGGAGCGCCTCCGGGAATCAGAACTTGCGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGTGCGTCCTACTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGCAATGTCAGCAGCGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGTCAGCCTGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTTCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCATGCCATTGAAGTTGCATGGAGCAGGGGAAATATTGACTCCATTTCTTCGCTGTTCGGGTATACTGTGAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCATA
A

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-119)

• Sporulation initiation factor Spo0A C terminal (Spo0A_C) (156-259)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
spo0A	Bacillus subtilis subsp. subtilis str. 168	94.757	100	0.951