Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   S101359_RS06015 Genome accession   NZ_CP021500
Coordinates   1242059..1242250 (+) Length   63 a.a.
NCBI ID   WP_010788228.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SRCM101359     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1237059..1247250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101359_RS05985 (S101359_01184) argF 1237896..1238849 (+) 954 WP_010788224.1 ornithine carbamoyltransferase -
  S101359_RS05990 (S101359_01185) - 1238948..1239127 (+) 180 WP_003327605.1 YjzC family protein -
  S101359_RS05995 (S101359_01186) - 1239156..1239344 (-) 189 WP_003327604.1 YjzD family protein -
  S101359_RS06000 (S101359_01187) - 1239604..1240338 (+) 735 WP_063637420.1 hypothetical protein -
  S101359_RS06005 (S101359_01188) - 1240426..1241001 (+) 576 WP_088116918.1 hypothetical protein -
  S101359_RS06010 (S101359_01190) med 1241091..1242044 (+) 954 WP_010788227.1 BMP family ABC transporter substrate-binding protein Regulator
  S101359_RS06015 (S101359_01191) comZ 1242059..1242250 (+) 192 WP_010788228.1 ComZ family protein Regulator
  S101359_RS06020 (S101359_01192) - 1242280..1242507 (-) 228 WP_088116919.1 hypothetical protein -
  S101359_RS06025 (S101359_01193) fabH 1242679..1243617 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  S101359_RS06030 (S101359_01194) fabF 1243639..1244877 (+) 1239 WP_003327596.1 beta-ketoacyl-ACP synthase II -
  S101359_RS06035 (S101359_01195) - 1244955..1245740 (+) 786 WP_088116920.1 DUF2268 domain-containing protein -
  S101359_RS06040 (S101359_01196) - 1245932..1246918 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7112.08 Da        Isoelectric Point: 4.2564

>NTDB_id=231275 S101359_RS06015 WP_010788228.1 1242059..1242250(+) (comZ) [Bacillus atrophaeus strain SRCM101359]
MQHEKSLEFLQIAMKYLPEAKAELEKSGIELSAESIQPFMNLFSTVMAEAYELGKSDAKSENE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=231275 S101359_RS06015 WP_010788228.1 1242059..1242250(+) (comZ) [Bacillus atrophaeus strain SRCM101359]
ATGCAGCATGAAAAATCACTTGAATTTTTGCAAATCGCGATGAAATATTTGCCGGAAGCAAAAGCGGAGCTGGAAAAATC
GGGGATCGAGCTGTCCGCCGAGTCCATACAGCCATTTATGAATCTGTTTTCAACGGTGATGGCGGAAGCTTACGAGCTTG
GCAAGTCCGACGCAAAATCAGAAAATGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

90.476

100

0.905

Multiple sequence alignment