Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | PLU_RS23245 | Genome accession | NC_005126 |
| Coordinates | 5478193..5479278 (-) | Length | 361 a.a. |
| NCBI ID | WP_011148764.1 | Uniprot ID | A0A6L9JU94 |
| Organism | Photorhabdus laumondii subsp. laumondii TTO1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 5473193..5484278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLU_RS23220 (plu4689) | - | 5475394..5475939 (+) | 546 | WP_011148759.1 | gamma carbonic anhydrase family protein | - |
| PLU_RS23225 (plu4690) | - | 5475915..5476178 (-) | 264 | WP_011148760.1 | DUF1488 domain-containing protein | - |
| PLU_RS23230 (plu4691) | aroE | 5476175..5476993 (-) | 819 | WP_011148761.1 | shikimate dehydrogenase | - |
| PLU_RS23235 (plu4692) | tsaC | 5477006..5477575 (-) | 570 | WP_011148762.1 | L-threonylcarbamoyladenylate synthase type 1 TsaC | - |
| PLU_RS23240 (plu4693) | - | 5477589..5478128 (-) | 540 | WP_041380425.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| PLU_RS23245 (plu4694) | dprA | 5478193..5479278 (-) | 1086 | WP_011148764.1 | DNA-protecting protein DprA | Machinery gene |
| PLU_RS23250 (plu4695) | def | 5479412..5479924 (+) | 513 | WP_011148765.1 | peptide deformylase | - |
| PLU_RS23255 (plu4696) | fmt | 5479949..5480896 (+) | 948 | WP_011148766.1 | methionyl-tRNA formyltransferase | - |
| PLU_RS23260 (plu4697) | rsmB | 5480967..5482256 (+) | 1290 | WP_011148767.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| PLU_RS23265 (plu4698) | trkA | 5482313..5483689 (+) | 1377 | WP_011148768.1 | Trk system potassium transporter TrkA | - |
| PLU_RS23270 (plu4699) | - | 5484026..5484226 (-) | 201 | WP_011148769.1 | alternative ribosome-rescue factor A | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 39609.83 Da Isoelectric Point: 7.0139
>NTDB_id=23121 PLU_RS23245 WP_011148764.1 5478193..5479278(-) (dprA) [Photorhabdus laumondii subsp. laumondii TTO1]
MEAMEVWLRMKMISHLATERAANVAEKLLYSGSRYLTVLKDSGLSPEQCLQFTKVNKTLLASCLKWLEQPEHHLLTYSHP
SYPPLLKQIHTPPLVLFVAGKPDILLKKQVAMVGSRTASYYGERWGRIFASELVGYELVIASGLAIGIDGICHRAALDSG
GKTVAVLGSGLGQIYPHRHGLLAKQIEENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEAGQNSGSLITARCAL
EQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATNAMDIVEHVYSSLQWLNMERTEEEVKPQFEQTELPFTDVLVNVGAEV
TPVDIIAQRSSLPITEVMTKLLELELLGKVTVVAGGYVRVN
MEAMEVWLRMKMISHLATERAANVAEKLLYSGSRYLTVLKDSGLSPEQCLQFTKVNKTLLASCLKWLEQPEHHLLTYSHP
SYPPLLKQIHTPPLVLFVAGKPDILLKKQVAMVGSRTASYYGERWGRIFASELVGYELVIASGLAIGIDGICHRAALDSG
GKTVAVLGSGLGQIYPHRHGLLAKQIEENGALVSEFFPDTPPRAKNFPRRNRIISGLSSAVIVVEAGQNSGSLITARCAL
EQGRDVFALPGLLGNSVSEGNHWLIKQGAYLATNAMDIVEHVYSSLQWLNMERTEEEVKPQFEQTELPFTDVLVNVGAEV
TPVDIIAQRSSLPITEVMTKLLELELLGKVTVVAGGYVRVN
Nucleotide
Download Length: 1086 bp
>NTDB_id=23121 PLU_RS23245 WP_011148764.1 5478193..5479278(-) (dprA) [Photorhabdus laumondii subsp. laumondii TTO1]
ATGGAAGCTATGGAAGTATGGTTGCGAATGAAGATGATTTCTCATTTGGCAACAGAGAGAGCAGCAAATGTTGCAGAAAA
ATTGTTATATTCCGGGAGTCGTTATCTCACTGTGTTGAAAGATAGTGGATTATCGCCAGAACAATGTCTGCAATTTACTA
AAGTAAATAAAACCTTACTAGCTTCATGCCTTAAGTGGCTGGAACAGCCAGAGCACCATTTATTGACATATTCTCACCCT
TCGTATCCACCTCTATTAAAGCAGATACATACCCCTCCGCTTGTGCTTTTTGTGGCAGGAAAACCAGATATTCTTTTAAA
GAAGCAGGTGGCGATGGTAGGGAGCAGGACAGCAAGTTATTATGGTGAGAGATGGGGAAGAATTTTTGCAAGTGAACTGG
TTGGATATGAGTTAGTTATTGCTAGTGGTTTAGCTATCGGTATTGATGGTATTTGTCACCGAGCTGCATTGGATAGTGGA
GGTAAAACAGTAGCTGTATTAGGTAGTGGGCTTGGACAGATTTATCCTCATAGACACGGATTATTAGCAAAGCAAATTGA
GGAGAATGGTGCTCTTGTTTCTGAATTTTTTCCGGATACTCCGCCACGCGCAAAAAATTTTCCTAGAAGAAATAGAATTA
TCAGTGGATTAAGCTCAGCAGTGATTGTTGTAGAGGCAGGTCAAAATAGTGGTTCGTTAATTACTGCTCGTTGTGCCCTT
GAACAAGGAAGGGATGTATTTGCATTACCAGGGCTTTTGGGAAATTCAGTGAGCGAAGGCAATCACTGGTTAATAAAACA
AGGTGCATACTTAGCTACAAATGCAATGGATATTGTGGAACATGTTTACAGTTCATTACAATGGTTGAATATGGAAAGAA
CGGAGGAAGAAGTAAAACCGCAGTTTGAGCAAACTGAGTTGCCATTTACTGATGTGCTAGTTAACGTAGGCGCTGAAGTA
ACGCCTGTTGATATTATTGCTCAGCGTTCTTCATTACCTATAACTGAGGTCATGACAAAGCTCCTTGAGCTGGAATTACT
GGGTAAGGTGACTGTGGTTGCTGGTGGTTATGTGCGTGTGAATTAA
ATGGAAGCTATGGAAGTATGGTTGCGAATGAAGATGATTTCTCATTTGGCAACAGAGAGAGCAGCAAATGTTGCAGAAAA
ATTGTTATATTCCGGGAGTCGTTATCTCACTGTGTTGAAAGATAGTGGATTATCGCCAGAACAATGTCTGCAATTTACTA
AAGTAAATAAAACCTTACTAGCTTCATGCCTTAAGTGGCTGGAACAGCCAGAGCACCATTTATTGACATATTCTCACCCT
TCGTATCCACCTCTATTAAAGCAGATACATACCCCTCCGCTTGTGCTTTTTGTGGCAGGAAAACCAGATATTCTTTTAAA
GAAGCAGGTGGCGATGGTAGGGAGCAGGACAGCAAGTTATTATGGTGAGAGATGGGGAAGAATTTTTGCAAGTGAACTGG
TTGGATATGAGTTAGTTATTGCTAGTGGTTTAGCTATCGGTATTGATGGTATTTGTCACCGAGCTGCATTGGATAGTGGA
GGTAAAACAGTAGCTGTATTAGGTAGTGGGCTTGGACAGATTTATCCTCATAGACACGGATTATTAGCAAAGCAAATTGA
GGAGAATGGTGCTCTTGTTTCTGAATTTTTTCCGGATACTCCGCCACGCGCAAAAAATTTTCCTAGAAGAAATAGAATTA
TCAGTGGATTAAGCTCAGCAGTGATTGTTGTAGAGGCAGGTCAAAATAGTGGTTCGTTAATTACTGCTCGTTGTGCCCTT
GAACAAGGAAGGGATGTATTTGCATTACCAGGGCTTTTGGGAAATTCAGTGAGCGAAGGCAATCACTGGTTAATAAAACA
AGGTGCATACTTAGCTACAAATGCAATGGATATTGTGGAACATGTTTACAGTTCATTACAATGGTTGAATATGGAAAGAA
CGGAGGAAGAAGTAAAACCGCAGTTTGAGCAAACTGAGTTGCCATTTACTGATGTGCTAGTTAACGTAGGCGCTGAAGTA
ACGCCTGTTGATATTATTGCTCAGCGTTCTTCATTACCTATAACTGAGGTCATGACAAAGCTCCTTGAGCTGGAATTACT
GGGTAAGGTGACTGTGGTTGCTGGTGGTTATGTGCGTGTGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Vibrio campbellii strain DS40M4 |
48.361 |
100 |
0.49 |
| dprA | Vibrio cholerae strain A1552 |
46.348 |
98.615 |
0.457 |
| dprA | Glaesserella parasuis strain SC1401 |
48.06 |
92.798 |
0.446 |
| dprA | Legionella pneumophila strain ERS1305867 |
42.901 |
89.751 |
0.385 |