Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   S100757_RS02180 Genome accession   NZ_CP021499
Coordinates   427218..427340 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis subsp. subtilis strain SRCM100757     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 422218..432340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100757_RS02165 (S100757_00421) yclJ 423832..424515 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  S100757_RS02170 (S100757_00422) yclK 424502..425923 (+) 1422 WP_080348068.1 two-component system sensor histidine kinase YclK -
  S100757_RS02175 (S100757_00423) rapC 426086..427234 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  S100757_RS02180 (S100757_00424) phrC 427218..427340 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  S100757_RS02185 yczM 427440..427529 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  S100757_RS02190 (S100757_00425) yczN 427611..427724 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  S100757_RS02195 (S100757_00426) thrD 427877..429241 (-) 1365 WP_029726569.1 aspartate kinase -
  S100757_RS02200 (S100757_00427) ceuB 429626..430576 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  S100757_RS02205 (S100757_00428) yclO 430569..431516 (+) 948 WP_015252820.1 petrobactin ABC transporter permease YclO -
  S100757_RS02210 (S100757_00429) yclP 431510..432268 (+) 759 WP_015252819.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=231183 S100757_RS02180 WP_003224994.1 427218..427340(+) (phrC) [Bacillus subtilis subsp. subtilis strain SRCM100757]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=231183 S100757_RS02180 WP_003224994.1 427218..427340(+) (phrC) [Bacillus subtilis subsp. subtilis strain SRCM100757]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment