Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   S101444_RS02000 Genome accession   NZ_CP021498
Coordinates   368978..369376 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis subsp. subtilis strain SRCM101444     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 363978..374376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101444_RS21125 (S101444_00381) - 364731..364927 (+) 197 Protein_340 hypothetical protein -
  S101444_RS01970 (S101444_00382) yckC 364946..365395 (+) 450 WP_087614278.1 RDD family protein -
  S101444_RS01975 (S101444_00383) yckD 365477..365809 (+) 333 WP_003246247.1 YckD family protein -
  S101444_RS01980 (S101444_00384) - 365937..366359 (+) 423 WP_198297576.1 MarR family transcriptional regulator -
  S101444_RS01985 (S101444_00385) - 366347..366688 (+) 342 WP_087614281.1 DUF3147 family protein -
  S101444_RS01990 (S101444_00386) - 366707..367435 (+) 729 WP_087614282.1 AAA family ATPase -
  S101444_RS01995 (S101444_00387) bglC 367508..368941 (+) 1434 WP_087614284.1 6-phospho-beta-glucosidase -
  S101444_RS02000 (S101444_00388) nin/comJ 368978..369376 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  S101444_RS02005 (S101444_00389) nucA/comI 369403..369852 (-) 450 WP_129092925.1 DNA-entry nuclease Machinery gene
  S101444_RS02010 (S101444_00390) tlpC 370020..371741 (-) 1722 WP_087614285.1 methyl-accepting chemotaxis protein TlpC -
  S101444_RS02015 (S101444_00391) hxlB 371852..372409 (-) 558 WP_046160042.1 6-phospho-3-hexuloisomerase -
  S101444_RS02020 (S101444_00392) hxlA 372415..373047 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  S101444_RS02025 (S101444_00393) hxlR 373279..373641 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=231101 S101444_RS02000 WP_015715226.1 368978..369376(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain SRCM101444]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=231101 S101444_RS02000 WP_015715226.1 368978..369376(-) (nin/comJ) [Bacillus subtilis subsp. subtilis strain SRCM101444]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment