Detailed information NTG0231083

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAGQ_RS16880
• Genome accession: NZ_CP021495
• Coordinates: 3395279..3396442 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain GQJK49
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390279..3401442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAGQ_RS16850 (BAGQ_3568)	-	3390543..3390962 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
BAGQ_RS16855 (BAGQ_3569)	comFC	3391036..3391725 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
BAGQ_RS16860 (BAGQ_3570)	-	3391731..3392015 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
BAGQ_RS16865 (BAGQ_3571)	comFA	3392073..3393458 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
BAGQ_RS16870 (BAGQ_3572)	-	3393567..3394415 (-)	849	WP_032876160.1	DegV family protein	-
BAGQ_RS16875 (BAGQ_3573)	degU	3394513..3395202 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAGQ_RS16880 (BAGQ_3574)	degS	3395279..3396442 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BAGQ_RS16885 (BAGQ_3575)	-	3396665..3397312 (+)	648	WP_007614107.1	YigZ family protein	-
BAGQ_RS16890 (BAGQ_3576)	-	3397317..3398498 (+)	1182	WP_032876157.1	LCP family protein	-
BAGQ_RS16895 (BAGQ_3577)	-	3398597..3399673 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BAGQ_RS16900 (BAGQ_3578)	tuaH	3399806..3401002 (-)	1197	WP_032876154.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=231083 BAGQ_RS16880 WP_007407484.1 3395279..3396442(-) (degS) [Bacillus velezensis strain GQJK49]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=231083 BAGQ_RS16880 WP_007407484.1 3395279..3396442(-) (degS) [Bacillus velezensis strain GQJK49]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951