Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GBS_RS06715 Genome accession   NC_004368
Coordinates   1307858..1308340 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae NEM316     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1302858..1313340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBS_RS06695 (gbs1265) alsS 1303117..1304799 (-) 1683 WP_000140346.1 acetolactate synthase AlsS -
  GBS_RS06700 (gbs1266) - 1304909..1306135 (-) 1227 WP_000934876.1 hypothetical protein -
  GBS_RS06705 (gbs1267) - 1306125..1307315 (-) 1191 WP_001081540.1 AI-2E family transporter -
  GBS_RS06710 (gbs1268) - 1307407..1307868 (-) 462 WP_000796045.1 NUDIX hydrolase -
  GBS_RS06715 (gbs1269) mutX 1307858..1308340 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  GBS_RS06720 (gbs1270) hylB 1308557..1311775 (+) 3219 WP_000403400.1 hyaluronate lyase -
  GBS_RS06725 (gbs1271) rfbB 1311827..1312873 (-) 1047 WP_000134282.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=23077 GBS_RS06715 WP_000163512.1 1307858..1308340(-) (mutX) [Streptococcus agalactiae NEM316]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=23077 GBS_RS06715 WP_000163512.1 1307858..1308340(-) (mutX) [Streptococcus agalactiae NEM316]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment