Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BEI_RS16025 | Genome accession | NZ_CP021435 |
| Coordinates | 3452474..3453727 (-) | Length | 417 a.a. |
| NCBI ID | WP_097790462.1 | Uniprot ID | A0A291PBK2 |
| Organism | Halomonas beimenensis strain NTU-111 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3447474..3458727
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEI_RS16000 (BEI_3246) | argB | 3448007..3448924 (+) | 918 | WP_097790457.1 | acetylglutamate kinase | - |
| BEI_RS16005 (BEI_3247) | slmA | 3448964..3449575 (+) | 612 | WP_097790458.1 | nucleoid occlusion factor SlmA | - |
| BEI_RS16010 (BEI_3248) | rpoH | 3449822..3450688 (-) | 867 | WP_097790459.1 | RNA polymerase sigma factor RpoH | - |
| BEI_RS16015 (BEI_3249) | ftsX | 3450841..3451812 (-) | 972 | WP_097790460.1 | permease-like cell division protein FtsX | - |
| BEI_RS16020 (BEI_3250) | ftsE | 3451809..3452477 (-) | 669 | WP_097790461.1 | cell division ATP-binding protein FtsE | - |
| BEI_RS16025 (BEI_3251) | pilA | 3452474..3453727 (-) | 1254 | WP_097790462.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BEI_RS16030 (BEI_3252) | rsmD | 3453819..3454469 (+) | 651 | WP_097790463.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BEI_RS16035 (BEI_3253) | - | 3454542..3454751 (+) | 210 | WP_097790464.1 | cell division protein ZapB | - |
| BEI_RS16040 (BEI_3254) | - | 3454748..3455212 (-) | 465 | WP_097790465.1 | GNAT family N-acetyltransferase | - |
| BEI_RS16045 (BEI_3255) | - | 3455205..3456029 (-) | 825 | WP_097790466.1 | hypothetical protein | - |
| BEI_RS16050 (BEI_3256) | - | 3456026..3456337 (-) | 312 | WP_097790467.1 | BolA family protein | - |
| BEI_RS16055 (BEI_3257) | - | 3456366..3457778 (-) | 1413 | WP_097790468.1 | MFS transporter | - |
| BEI_RS16060 (BEI_3258) | - | 3457848..3458234 (-) | 387 | WP_097790469.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 417 a.a. Molecular weight: 44752.60 Da Isoelectric Point: 4.6659
>NTDB_id=230749 BEI_RS16025 WP_097790462.1 3452474..3453727(-) (pilA) [Halomonas beimenensis strain NTU-111]
MFGFLKRKKKQEEQQQDPQARPESSAEQEEAEAASGSPEADEAAAGSETAATEAEPAPEAEKATEPEKASAIEPVSEPER
APQPAPAPEPASPPKAAPREKPRAEKKGWLARMREGLGKTRANLTEGLAGLFLGRKQIDDDLMEELETQLLMADVGIEAT
TEIIDRLTERVSRKELKDPQALYQALQDELATLLEGVTRPLELPPKGQGPFVILVVGVNGVGKTTTIGKLTQRFQREGRS
VMLAAGDTFRAAAVEQLKVWGERNDVPVIAQHTGADSASVVYDALAAARARGVDVLIADTAGRLHNKAHLMEELKKVRRV
MGKLDEQAPHEVMLVLDAGTGQNALSQAATFNEAVPVTGITLTKLDGTAKGGIIFALAQQLGTPIRFIGVGETLDDLRPF
AAREFVDALFDRGDAEA
MFGFLKRKKKQEEQQQDPQARPESSAEQEEAEAASGSPEADEAAAGSETAATEAEPAPEAEKATEPEKASAIEPVSEPER
APQPAPAPEPASPPKAAPREKPRAEKKGWLARMREGLGKTRANLTEGLAGLFLGRKQIDDDLMEELETQLLMADVGIEAT
TEIIDRLTERVSRKELKDPQALYQALQDELATLLEGVTRPLELPPKGQGPFVILVVGVNGVGKTTTIGKLTQRFQREGRS
VMLAAGDTFRAAAVEQLKVWGERNDVPVIAQHTGADSASVVYDALAAARARGVDVLIADTAGRLHNKAHLMEELKKVRRV
MGKLDEQAPHEVMLVLDAGTGQNALSQAATFNEAVPVTGITLTKLDGTAKGGIIFALAQQLGTPIRFIGVGETLDDLRPF
AAREFVDALFDRGDAEA
Nucleotide
Download Length: 1254 bp
>NTDB_id=230749 BEI_RS16025 WP_097790462.1 3452474..3453727(-) (pilA) [Halomonas beimenensis strain NTU-111]
ATGTTCGGTTTTCTCAAGCGCAAGAAGAAGCAGGAAGAGCAGCAGCAGGACCCCCAGGCGCGGCCGGAATCCTCGGCCGA
GCAGGAGGAGGCCGAGGCCGCCTCGGGCTCGCCTGAGGCCGACGAGGCGGCGGCCGGCTCCGAGACCGCCGCGACCGAGG
CCGAGCCGGCACCGGAGGCCGAGAAGGCCACTGAGCCCGAGAAGGCATCCGCAATCGAGCCGGTGTCCGAGCCCGAGCGA
GCGCCGCAGCCTGCGCCGGCTCCCGAGCCCGCCTCGCCGCCCAAGGCGGCGCCCCGGGAGAAGCCCAGGGCCGAGAAGAA
GGGCTGGCTCGCCCGGATGCGCGAGGGGCTCGGCAAGACCCGGGCCAACCTCACCGAGGGGTTGGCCGGACTCTTCCTGG
GGCGCAAGCAGATCGACGACGACCTGATGGAGGAGCTCGAGACCCAGCTGTTGATGGCGGACGTGGGCATCGAGGCCACC
ACCGAGATCATCGATCGTCTCACCGAACGAGTCTCGCGGAAGGAGCTCAAGGATCCCCAGGCCCTCTACCAGGCCCTGCA
GGACGAGCTGGCGACCCTGCTCGAGGGGGTGACTCGGCCGCTCGAACTGCCGCCCAAGGGCCAGGGACCCTTTGTGATCC
TGGTGGTCGGCGTCAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTCACCCAACGCTTCCAGCGCGAGGGGCGCAGC
GTCATGCTGGCCGCCGGCGACACCTTCCGGGCCGCCGCCGTGGAGCAGCTCAAGGTATGGGGCGAGCGCAACGACGTCCC
GGTGATCGCCCAGCACACCGGCGCCGACAGCGCCTCGGTGGTCTATGACGCCCTGGCCGCGGCCCGGGCGCGGGGCGTCG
ACGTGCTGATCGCCGACACGGCCGGTCGGCTGCATAACAAGGCTCACCTGATGGAGGAGCTCAAGAAGGTTCGCCGGGTG
ATGGGCAAGCTCGACGAGCAGGCTCCCCACGAGGTGATGCTGGTGCTCGACGCCGGTACCGGGCAGAACGCCCTCTCCCA
GGCCGCGACCTTCAACGAGGCGGTGCCGGTCACCGGCATCACCCTGACCAAGCTCGATGGCACCGCCAAGGGCGGCATCA
TCTTCGCCCTGGCCCAGCAGCTGGGCACCCCGATCCGTTTCATCGGCGTCGGCGAGACCCTGGACGACCTGCGGCCCTTC
GCCGCCCGAGAGTTCGTCGACGCCCTCTTCGATCGGGGTGACGCCGAGGCATGA
ATGTTCGGTTTTCTCAAGCGCAAGAAGAAGCAGGAAGAGCAGCAGCAGGACCCCCAGGCGCGGCCGGAATCCTCGGCCGA
GCAGGAGGAGGCCGAGGCCGCCTCGGGCTCGCCTGAGGCCGACGAGGCGGCGGCCGGCTCCGAGACCGCCGCGACCGAGG
CCGAGCCGGCACCGGAGGCCGAGAAGGCCACTGAGCCCGAGAAGGCATCCGCAATCGAGCCGGTGTCCGAGCCCGAGCGA
GCGCCGCAGCCTGCGCCGGCTCCCGAGCCCGCCTCGCCGCCCAAGGCGGCGCCCCGGGAGAAGCCCAGGGCCGAGAAGAA
GGGCTGGCTCGCCCGGATGCGCGAGGGGCTCGGCAAGACCCGGGCCAACCTCACCGAGGGGTTGGCCGGACTCTTCCTGG
GGCGCAAGCAGATCGACGACGACCTGATGGAGGAGCTCGAGACCCAGCTGTTGATGGCGGACGTGGGCATCGAGGCCACC
ACCGAGATCATCGATCGTCTCACCGAACGAGTCTCGCGGAAGGAGCTCAAGGATCCCCAGGCCCTCTACCAGGCCCTGCA
GGACGAGCTGGCGACCCTGCTCGAGGGGGTGACTCGGCCGCTCGAACTGCCGCCCAAGGGCCAGGGACCCTTTGTGATCC
TGGTGGTCGGCGTCAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTCACCCAACGCTTCCAGCGCGAGGGGCGCAGC
GTCATGCTGGCCGCCGGCGACACCTTCCGGGCCGCCGCCGTGGAGCAGCTCAAGGTATGGGGCGAGCGCAACGACGTCCC
GGTGATCGCCCAGCACACCGGCGCCGACAGCGCCTCGGTGGTCTATGACGCCCTGGCCGCGGCCCGGGCGCGGGGCGTCG
ACGTGCTGATCGCCGACACGGCCGGTCGGCTGCATAACAAGGCTCACCTGATGGAGGAGCTCAAGAAGGTTCGCCGGGTG
ATGGGCAAGCTCGACGAGCAGGCTCCCCACGAGGTGATGCTGGTGCTCGACGCCGGTACCGGGCAGAACGCCCTCTCCCA
GGCCGCGACCTTCAACGAGGCGGTGCCGGTCACCGGCATCACCCTGACCAAGCTCGATGGCACCGCCAAGGGCGGCATCA
TCTTCGCCCTGGCCCAGCAGCTGGGCACCCCGATCCGTTTCATCGGCGTCGGCGAGACCCTGGACGACCTGCGGCCCTTC
GCCGCCCGAGAGTTCGTCGACGCCCTCTTCGATCGGGGTGACGCCGAGGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
47.806 |
100 |
0.496 |