Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | CSB94_RS11610 | Genome accession | NZ_CP027166 |
| Coordinates | 2386608..2387132 (+) | Length | 174 a.a. |
| NCBI ID | WP_003095836.1 | Uniprot ID | G3XCX7 |
| Organism | Pseudomonas aeruginosa strain AR_0357 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2381608..2392132
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB94_RS11590 (CSB94_2338) | - | 2381675..2384146 (-) | 2472 | WP_003095841.1 | penicillin-binding protein 1A | - |
| CSB94_RS11595 (CSB94_2339) | pilM | 2384331..2385395 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| CSB94_RS11600 (CSB94_2340) | pilN | 2385395..2385991 (+) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| CSB94_RS11605 (CSB94_2341) | pilO | 2385988..2386611 (+) | 624 | WP_003095838.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CSB94_RS11610 (CSB94_2342) | comL/pilP | 2386608..2387132 (+) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| CSB94_RS11615 (CSB94_2343) | pilQ | 2387186..2389330 (+) | 2145 | WP_003095835.1 | type 4a pilus secretin PilQ | Machinery gene |
| CSB94_RS11620 (CSB94_2344) | aroK | 2389342..2389860 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| CSB94_RS11625 (CSB94_2345) | aroB | 2389910..2391016 (+) | 1107 | WP_003095831.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19053.84 Da Isoelectric Point: 9.4114
>NTDB_id=230702 CSB94_RS11610 WP_003095836.1 2386608..2387132(+) (comL/pilP) [Pseudomonas aeruginosa strain AR_0357]
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=230702 CSB94_RS11610 WP_003095836.1 2386608..2387132(+) (comL/pilP) [Pseudomonas aeruginosa strain AR_0357]
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGACCCAAGGGTACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGATGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGACCCAAGGGTACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGATGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.416 |
99.425 |
0.362 |