Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | AB987_RS06085 | Genome accession | NZ_CP021347 |
| Coordinates | 1248107..1248433 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain B8300 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1243107..1253433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB987_RS06065 (AB987_1219) | - | 1243208..1243837 (-) | 630 | WP_000219972.1 | FHA domain-containing protein | - |
| AB987_RS06070 (AB987_1220) | gspD | 1243878..1246154 (-) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| AB987_RS06075 (AB987_1221) | - | 1246196..1247032 (-) | 837 | WP_000870031.1 | type II secretion system protein N | - |
| AB987_RS06080 (AB987_1222) | gspN | 1247032..1247775 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| AB987_RS06085 (AB987_1223) | hns | 1248107..1248433 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| AB987_RS19380 | - | 1248628..1249190 (-) | 563 | Protein_1176 | acyl-CoA thioesterase | - |
| AB987_RS06100 (AB987_1226) | - | 1249197..1250390 (-) | 1194 | WP_032039913.1 | membrane protein | - |
| AB987_RS06105 (AB987_1227) | - | 1250400..1251239 (-) | 840 | WP_049590753.1 | hypothetical protein | - |
| AB987_RS06110 (AB987_1228) | - | 1251248..1252015 (-) | 768 | WP_049590754.1 | uroporphyrinogen-III synthase | - |
| AB987_RS06115 (AB987_1229) | hemC | 1252020..1252937 (-) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=230089 AB987_RS06085 WP_000801427.1 1248107..1248433(-) (hns) [Acinetobacter baumannii strain B8300]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=230089 AB987_RS06085 WP_000801427.1 1248107..1248433(-) (hns) [Acinetobacter baumannii strain B8300]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |