Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | C5099_RS18745 | Genome accession | NZ_CP027103 |
| Coordinates | 3590626..3591141 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain RM14723 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3585626..3596141
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5099_RS18725 (C5099_18715) | emrA | 3585774..3586946 (+) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| C5099_RS18730 (C5099_18720) | emrB | 3586963..3588501 (+) | 1539 | WP_001296316.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| C5099_RS18735 (C5099_18725) | - | 3588759..3589466 (+) | 708 | WP_001097131.1 | RNA ligase family protein | - |
| C5099_RS18740 (C5099_18730) | - | 3589463..3590575 (+) | 1113 | WP_000638134.1 | ATP-binding protein | - |
| C5099_RS18745 (C5099_18735) | luxS | 3590626..3591141 (-) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| C5099_RS18750 (C5099_18740) | gshA | 3591291..3592847 (-) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| C5099_RS18755 (C5099_18745) | yqaA | 3592920..3593348 (-) | 429 | WP_001287462.1 | YqaA family protein | - |
| C5099_RS18760 (C5099_18750) | yqaB | 3593345..3593911 (-) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| C5099_RS18790 (C5099_18780) | csrA | 3595100..3595285 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=230056 C5099_RS18745 WP_001130208.1 3590626..3591141(-) (luxS) [Escherichia coli strain RM14723]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=230056 C5099_RS18745 WP_001130208.1 3590626..3591141(-) (luxS) [Escherichia coli strain RM14723]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |