Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FORC77_RS00535 | Genome accession | NZ_CP027030 |
| Coordinates | 113841..115028 (+) | Length | 395 a.a. |
| NCBI ID | WP_065090018.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus strain FORC_077 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 108841..120028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC77_RS00495 (FORC77_0092) | - | 109022..109351 (-) | 330 | WP_011079159.1 | DUF2500 domain-containing protein | - |
| FORC77_RS00500 (FORC77_0093) | - | 109587..109955 (+) | 369 | WP_013570937.1 | hypothetical protein | - |
| FORC77_RS00510 (FORC77_0094) | - | 110987..111607 (+) | 621 | WP_045596327.1 | lysoplasmalogenase | - |
| FORC77_RS00515 (FORC77_0095) | - | 111684..111905 (+) | 222 | WP_011149125.1 | YecH family metal-binding protein | - |
| FORC77_RS00520 (FORC77_0097) | - | 112098..112691 (+) | 594 | WP_011079163.1 | YhgN family NAAT transporter | - |
| FORC77_RS00525 (FORC77_0098) | - | 112757..113023 (-) | 267 | WP_011079164.1 | DUF1145 domain-containing protein | - |
| FORC77_RS00530 (FORC77_0099) | rsmD | 113042..113635 (-) | 594 | WP_011079165.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FORC77_RS00535 (FORC77_0100) | pilA | 113841..115028 (+) | 1188 | WP_065090018.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FORC77_RS00540 (FORC77_0101) | ftsE | 115049..115726 (+) | 678 | WP_011079167.1 | cell division ATP-binding protein FtsE | - |
| FORC77_RS00545 (FORC77_0102) | ftsX | 115713..116681 (+) | 969 | WP_011079168.1 | permease-like cell division protein FtsX | - |
| FORC77_RS00550 (FORC77_0103) | rpoH | 116858..117715 (+) | 858 | WP_011079169.1 | RNA polymerase sigma factor RpoH | - |
| FORC77_RS00555 (FORC77_0104) | glpE | 118151..118471 (+) | 321 | WP_011079170.1 | thiosulfate sulfurtransferase GlpE | - |
| FORC77_RS00560 (FORC77_0105) | glpG | 118556..119398 (+) | 843 | WP_045596329.1 | rhomboid family intramembrane serine protease GlpG | - |
| FORC77_RS00565 (FORC77_0106) | - | 119447..119857 (-) | 411 | WP_011079172.1 | flagellar basal body-associated protein FliL | - |
Sequence
Protein
Download Length: 395 a.a. Molecular weight: 43188.09 Da Isoelectric Point: 4.4147
>NTDB_id=229922 FORC77_RS00535 WP_065090018.1 113841..115028(+) (pilA) [Vibrio vulnificus strain FORC_077]
MTEKKKRGLLSWLGFGDDDQVKQPEPAQSEEVISESDEKTVESVEPIVSQEVVEEVAVEPISEPAAEEPVEATPVVVEAP
RVQEQEKPTESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLVADVGMDTTLKIIENLTEKASRRDLKD
GEALYGLLKEEMAEILSKVEQPLQVDSSKTPYVILMVGVNGVGKTTTIGKLAKQFQNQGKKVMLAAGDTFRAAAVEQLQV
WGERNNVPVIAQHTGADSASVIYDAIEAAKARGVDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAG
TGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFNIPIRYIGVGEGIEDLRPFETQEFIDALFSREE
MTEKKKRGLLSWLGFGDDDQVKQPEPAQSEEVISESDEKTVESVEPIVSQEVVEEVAVEPISEPAAEEPVEATPVVVEAP
RVQEQEKPTESFFARLKRSLSRTKANIGAGFFGLFKGKKIDDDLFEELEEQLLVADVGMDTTLKIIENLTEKASRRDLKD
GEALYGLLKEEMAEILSKVEQPLQVDSSKTPYVILMVGVNGVGKTTTIGKLAKQFQNQGKKVMLAAGDTFRAAAVEQLQV
WGERNNVPVIAQHTGADSASVIYDAIEAAKARGVDVVIADTAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAG
TGQNAISQAKLFSDVAPITGITLTKLDGTAKGGVIFAIADQFNIPIRYIGVGEGIEDLRPFETQEFIDALFSREE
Nucleotide
Download Length: 1188 bp
>NTDB_id=229922 FORC77_RS00535 WP_065090018.1 113841..115028(+) (pilA) [Vibrio vulnificus strain FORC_077]
ATGACGGAAAAGAAAAAGCGCGGATTACTATCGTGGCTTGGCTTTGGTGACGATGACCAAGTAAAACAACCAGAGCCTGC
ACAATCAGAAGAGGTGATCAGCGAGTCTGACGAAAAAACCGTAGAGAGCGTTGAACCGATTGTCAGCCAAGAAGTGGTTG
AAGAGGTGGCGGTAGAACCAATCAGCGAACCAGCAGCTGAAGAACCCGTTGAAGCGACACCTGTGGTGGTTGAAGCACCG
CGCGTGCAAGAACAAGAAAAACCAACAGAAAGCTTTTTTGCGCGTCTAAAACGTAGCTTGAGCCGCACGAAAGCTAATAT
CGGCGCTGGTTTCTTTGGCCTATTTAAAGGCAAAAAAATCGATGATGATCTGTTTGAAGAGTTGGAAGAACAGCTACTCG
TTGCGGATGTGGGTATGGATACCACGTTGAAAATCATCGAAAACTTAACAGAAAAAGCGTCTCGCCGTGACTTAAAAGAT
GGTGAGGCTCTGTATGGTTTGCTCAAAGAAGAGATGGCGGAGATCCTCTCTAAGGTTGAGCAACCATTGCAAGTGGACAG
CAGCAAAACCCCTTACGTTATCCTGATGGTCGGGGTAAATGGTGTGGGTAAGACCACCACCATTGGTAAGTTGGCGAAAC
AGTTCCAAAATCAAGGTAAGAAAGTGATGTTGGCGGCGGGCGATACCTTCCGTGCGGCGGCCGTTGAGCAGTTGCAAGTG
TGGGGCGAGCGTAACAATGTCCCAGTAATCGCGCAGCATACTGGCGCAGACAGTGCATCGGTGATTTATGATGCGATTGA
AGCCGCCAAAGCGCGTGGCGTTGATGTGGTGATCGCCGATACTGCGGGTCGCTTGCAAAACAAGAGCAACTTGATGGAAG
AGCTGCGCAAAATTGTCCGAGTGATGAAGAAAATCGACGACTCCGCACCGCATGAAATCATGTTGACCTTGGATGCGGGC
ACTGGTCAGAACGCCATCAGCCAAGCGAAACTGTTTAGCGATGTCGCGCCGATCACCGGGATCACCTTGACCAAACTGGA
TGGCACTGCGAAAGGCGGCGTGATCTTTGCTATTGCCGATCAGTTTAACATTCCTATTCGTTACATCGGTGTGGGTGAAG
GGATTGAGGATCTCCGCCCGTTTGAAACCCAAGAATTTATCGACGCGCTATTTAGTCGAGAAGAGTAA
ATGACGGAAAAGAAAAAGCGCGGATTACTATCGTGGCTTGGCTTTGGTGACGATGACCAAGTAAAACAACCAGAGCCTGC
ACAATCAGAAGAGGTGATCAGCGAGTCTGACGAAAAAACCGTAGAGAGCGTTGAACCGATTGTCAGCCAAGAAGTGGTTG
AAGAGGTGGCGGTAGAACCAATCAGCGAACCAGCAGCTGAAGAACCCGTTGAAGCGACACCTGTGGTGGTTGAAGCACCG
CGCGTGCAAGAACAAGAAAAACCAACAGAAAGCTTTTTTGCGCGTCTAAAACGTAGCTTGAGCCGCACGAAAGCTAATAT
CGGCGCTGGTTTCTTTGGCCTATTTAAAGGCAAAAAAATCGATGATGATCTGTTTGAAGAGTTGGAAGAACAGCTACTCG
TTGCGGATGTGGGTATGGATACCACGTTGAAAATCATCGAAAACTTAACAGAAAAAGCGTCTCGCCGTGACTTAAAAGAT
GGTGAGGCTCTGTATGGTTTGCTCAAAGAAGAGATGGCGGAGATCCTCTCTAAGGTTGAGCAACCATTGCAAGTGGACAG
CAGCAAAACCCCTTACGTTATCCTGATGGTCGGGGTAAATGGTGTGGGTAAGACCACCACCATTGGTAAGTTGGCGAAAC
AGTTCCAAAATCAAGGTAAGAAAGTGATGTTGGCGGCGGGCGATACCTTCCGTGCGGCGGCCGTTGAGCAGTTGCAAGTG
TGGGGCGAGCGTAACAATGTCCCAGTAATCGCGCAGCATACTGGCGCAGACAGTGCATCGGTGATTTATGATGCGATTGA
AGCCGCCAAAGCGCGTGGCGTTGATGTGGTGATCGCCGATACTGCGGGTCGCTTGCAAAACAAGAGCAACTTGATGGAAG
AGCTGCGCAAAATTGTCCGAGTGATGAAGAAAATCGACGACTCCGCACCGCATGAAATCATGTTGACCTTGGATGCGGGC
ACTGGTCAGAACGCCATCAGCCAAGCGAAACTGTTTAGCGATGTCGCGCCGATCACCGGGATCACCTTGACCAAACTGGA
TGGCACTGCGAAAGGCGGCGTGATCTTTGCTATTGCCGATCAGTTTAACATTCCTATTCGTTACATCGGTGTGGGTGAAG
GGATTGAGGATCTCCGCCCGTTTGAAACCCAAGAATTTATCGACGCGCTATTTAGTCGAGAAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
49.307 |
91.392 |
0.451 |