Detailed information NTG0022980

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ALW85_RS07410
• Genome accession: NC_004757
• Coordinates: 1544349..1545347 (-)
• Length: 332 a.a.
• NCBI ID: WP_041357179.1
• Uniprot ID: -
• Organism: Nitrosomonas europaea ATCC 19718
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1539349..1550347

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ALW85_RS07380 (NE1410)	-	1539382..1539672 (-)	291	WP_011111978.1	PepSY domain-containing protein	-
ALW85_RS07385 (RK28_RS07375)	-	1539758..1540102 (-)	345	WP_041356764.1	hypothetical protein	-
ALW85_RS07390 (NE1411)	-	1540634..1541458 (+)	825	WP_011111979.1	methane monooxygenase/ammonia monooxygenase subunit C	-
ALW85_RS07395 (NE1412)	ispD	1541997..1542704 (-)	708	WP_011111980.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
ALW85_RS07400 (NE1413)	ftsX	1542741..1543661 (-)	921	WP_011111981.1	permease-like cell division protein FtsX	-
ALW85_RS07405 (NE1414)	-	1543658..1544311 (-)	654	WP_041356765.1	cell division ATP-binding protein FtsE	-
ALW85_RS07410 (NE1415)	pilA	1544349..1545347 (-)	999	WP_041357179.1	signal recognition particle-docking protein FtsY	Machinery gene
ALW85_RS07415 (NE1416)	-	1545453..1546841 (+)	1389	WP_011111984.1	M16 family metallopeptidase	-
ALW85_RS07420 (NE1417)	alr	1546964..1548052 (+)	1089	WP_011111985.1	alanine racemase	-
ALW85_RS07425 (NE1418)	-	1548071..1548865 (-)	795	WP_011111986.1	peptidyl-prolyl cis-trans isomerase	-
ALW85_RS07430 (NE1419)	-	1549022..1549324 (-)	303	WP_011111987.1	YciI family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36174.37 Da
• Isoelectric Point: 6.3662

>NTDB_id=22980 ALW85_RS07410 WP_041357179.1 1544349..1545347(-) (pilA) [Nitrosomonas europaea ATCC 19718]
MFSIFKSKKNPDEKNPAQVETRPVSFTDKIRQGLTRTRQQLGKQLSGLFGGRKIDEDLYEELETALLTADTGIEATNRLL
ESLRTRVRRDALDDSEQLKTVLQDVLTELLQPLERPLVTTGHTPFVIMIAGVNGVGKTTTIGKLAHYFQSQGHSVLLAAG
DTFRAAAQEQLKVWGERNQITVISQESDPGKKSDPAAVIFDAINAAIARKIDIVLADTAGRLTTQLHLMEEIRKIKRVIA
KAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTARGGVIAAIAAQFTDTPPALRFIGVGEGLDDLRP
FNAREFAEALFD

Nucleotide

• Length: 999 bp

>NTDB_id=22980 ALW85_RS07410 WP_041357179.1 1544349..1545347(-) (pilA) [Nitrosomonas europaea ATCC 19718]
ATGTTTAGTATTTTTAAATCCAAAAAGAATCCTGATGAAAAAAATCCGGCTCAGGTTGAAACCAGGCCGGTCAGTTTTAC
CGATAAGATCAGGCAAGGGCTGACACGTACACGACAGCAGCTTGGAAAGCAGTTATCCGGATTGTTCGGTGGCAGGAAAA
TCGATGAGGATTTGTACGAAGAGCTCGAAACTGCTTTATTGACGGCAGATACCGGAATCGAGGCGACAAACCGGTTGCTG
GAGTCATTGCGCACTCGTGTCAGGCGTGATGCACTGGATGATTCGGAACAGCTCAAAACAGTCTTGCAGGATGTGCTGAC
CGAACTGCTGCAGCCGCTGGAACGGCCACTGGTCACAACCGGGCATACACCTTTCGTGATCATGATCGCGGGTGTGAATG
GTGTTGGTAAAACTACGACCATCGGCAAGCTGGCCCATTATTTCCAGTCACAGGGACACTCCGTATTGCTGGCGGCGGGC
GACACTTTTCGCGCGGCAGCACAGGAACAGCTCAAGGTATGGGGTGAACGTAACCAGATCACGGTCATTTCACAGGAAAG
TGACCCGGGTAAAAAAAGTGATCCGGCAGCCGTGATTTTCGATGCAATCAATGCTGCCATTGCCAGAAAAATCGATATCG
TCCTGGCTGATACCGCCGGTCGCCTGACGACCCAGCTTCATCTGATGGAAGAAATCAGGAAAATCAAGCGGGTCATCGCT
AAAGCTATCCCGGATGCGCCACACGAGGTATTACTGGTGTTGGATGCAAATACTGGTCAGAACGCCGTCAGCCAGTTAAA
GGCTTTCAATGATGCGCTGGGCGTTACCGGGCTGGTCATGACCAAACTGGATGGAACTGCCAGGGGCGGAGTGATTGCTG
CCATCGCTGCACAATTTACCGATACACCACCAGCACTGCGCTTCATCGGGGTGGGGGAGGGGCTGGATGATTTAAGGCCC
TTCAATGCCCGTGAATTTGCTGAAGCACTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (124-331)

• SRP54-type protein, helical bundle domain (SRP54_N) (41-106)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.568	95.482	0.578