Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | PA45B_RS05105 | Genome accession | NZ_CP021288 |
| Coordinates | 1015339..1015968 (+) | Length | 209 a.a. |
| NCBI ID | WP_000839136.1 | Uniprot ID | A0A0D8W3X3 |
| Organism | Escherichia coli strain PA45B | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1010339..1020968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA45B_RS05080 (PA45B_0627) | ycbZ | 1010739..1012499 (-) | 1761 | WP_000156501.1 | Lon protease family protein | - |
| PA45B_RS05085 (PA45B_0626) | matP | 1012685..1013137 (+) | 453 | WP_000877153.1 | macrodomain Ter protein MatP | - |
| PA45B_RS05090 (PA45B_0625) | ompA | 1013215..1014255 (-) | 1041 | WP_001350588.1 | porin OmpA | - |
| PA45B_RS05100 (PA45B_0624) | sulA | 1014611..1015120 (-) | 510 | WP_000287750.1 | SOS-induced cell division inhibitor SulA | - |
| PA45B_RS05105 (PA45B_0623) | sxy/tfoX | 1015339..1015968 (+) | 630 | WP_000839136.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| PA45B_RS05110 (PA45B_0622) | yccS | 1015931..1018093 (-) | 2163 | WP_000875041.1 | YccS family putative transporter | - |
| PA45B_RS05115 (PA45B_0621) | yccF | 1018103..1018549 (-) | 447 | WP_001261236.1 | YccF domain-containing protein | - |
| PA45B_RS05120 (PA45B_0620) | helD | 1018672..1020726 (+) | 2055 | WP_001350178.1 | DNA helicase IV | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24128.06 Da Isoelectric Point: 9.2180
>NTDB_id=229737 PA45B_RS05105 WP_000839136.1 1015339..1015968(+) (sxy/tfoX) [Escherichia coli strain PA45B]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAPYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNIRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=229737 PA45B_RS05105 WP_000839136.1 1015339..1015968(+) (sxy/tfoX) [Escherichia coli strain PA45B]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGTAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACCGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGTACGCGCAATATTCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.043 |
100 |
0.99 |