Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | ALW85_RS03135 | Genome accession | NC_004757 |
| Coordinates | 649568..650788 (+) | Length | 406 a.a. |
| NCBI ID | WP_011111222.1 | Uniprot ID | Q82WR6 |
| Organism | Nitrosomonas europaea ATCC 19718 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 644568..655788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ALW85_RS03115 (NE0592) | - | 645323..646330 (+) | 1008 | WP_011111218.1 | uroporphyrinogen-III C-methyltransferase | - |
| ALW85_RS03120 (NE0593) | - | 646353..647522 (+) | 1170 | WP_011111219.1 | heme biosynthesis protein HemY | - |
| ALW85_RS03125 (NE0594) | - | 647527..648573 (-) | 1047 | WP_011111220.1 | CDP-6-deoxy-delta-3,4-glucoseen reductase | - |
| ALW85_RS03130 (NE0595) | - | 648603..649514 (+) | 912 | WP_011111221.1 | SDR family oxidoreductase | - |
| ALW85_RS03135 (NE0596) | pilC | 649568..650788 (+) | 1221 | WP_011111222.1 | type II secretion system F family protein | Machinery gene |
| ALW85_RS03140 (NE0597) | pilD | 650836..651696 (+) | 861 | WP_011111223.1 | prepilin peptidase | Machinery gene |
| ALW85_RS03145 (NE0598) | coaE | 651699..652310 (+) | 612 | WP_011111224.1 | dephospho-CoA kinase | - |
| ALW85_RS03150 (NE0599) | zapD | 652384..653139 (+) | 756 | WP_041357059.1 | cell division protein ZapD | - |
| ALW85_RS13525 | - | 653156..653350 (+) | 195 | WP_074671117.1 | DNA gyrase inhibitor YacG | - |
| ALW85_RS03155 (NE0600) | lplT | 653465..654730 (-) | 1266 | WP_041356478.1 | lysophospholipid transporter LplT | - |
Sequence
Protein
Download Length: 406 a.a. Molecular weight: 44054.87 Da Isoelectric Point: 9.5521
>NTDB_id=22973 ALW85_RS03135 WP_011111222.1 649568..650788(+) (pilC) [Nitrosomonas europaea ATCC 19718]
MATVAASEKKIKEFNFLWEGKDKAGKAVKGEMRAAGTVVVTSTLRRQGIRVTKITKARAGGKITDKDITLFTRQLATMMK
SGVPLLQAFDIVGKGHSNRAVGKLLMDIKSDVETGNSLANAFRKHPLYFDSLFCNLVAAGEAAGILDSLLDRLATYKEKI
QAIKGKIKSALFYPISIIVVAFVITAVIMIFVIPAFKELFQGFGADLPAPTLMVMAISDFFVDYWWAIFGCVGGGLYAFF
YTWKRSTVMQHVMDRLALRLPIFGEVIRKATIARWSRTLSTMFAAGVPLVEALNSVAGAAGNQVYFEATRNIQNEVSTGS
SLVDAMTATNVFPSMVLQMVSIGEESGSLDAMLSKIADFFEAEVDDAVEALSSLMEPIIMVVLGTLIGGMVVAMYLPIFK
MGQVVG
MATVAASEKKIKEFNFLWEGKDKAGKAVKGEMRAAGTVVVTSTLRRQGIRVTKITKARAGGKITDKDITLFTRQLATMMK
SGVPLLQAFDIVGKGHSNRAVGKLLMDIKSDVETGNSLANAFRKHPLYFDSLFCNLVAAGEAAGILDSLLDRLATYKEKI
QAIKGKIKSALFYPISIIVVAFVITAVIMIFVIPAFKELFQGFGADLPAPTLMVMAISDFFVDYWWAIFGCVGGGLYAFF
YTWKRSTVMQHVMDRLALRLPIFGEVIRKATIARWSRTLSTMFAAGVPLVEALNSVAGAAGNQVYFEATRNIQNEVSTGS
SLVDAMTATNVFPSMVLQMVSIGEESGSLDAMLSKIADFFEAEVDDAVEALSSLMEPIIMVVLGTLIGGMVVAMYLPIFK
MGQVVG
Nucleotide
Download Length: 1221 bp
>NTDB_id=22973 ALW85_RS03135 WP_011111222.1 649568..650788(+) (pilC) [Nitrosomonas europaea ATCC 19718]
ATGGCGACAGTTGCTGCATCAGAAAAGAAAATCAAGGAGTTCAATTTTCTGTGGGAAGGAAAGGATAAGGCTGGCAAGGC
AGTCAAAGGTGAGATGCGTGCTGCCGGTACTGTTGTGGTGACTTCCACACTGCGCCGCCAGGGTATCAGGGTGACGAAAA
TCACCAAAGCCAGAGCTGGTGGAAAAATAACGGATAAGGACATAACGCTGTTTACACGCCAGCTTGCGACGATGATGAAA
TCAGGGGTGCCTTTGCTGCAAGCATTTGATATCGTGGGTAAGGGACACAGCAACCGTGCCGTGGGAAAACTGCTGATGGA
CATCAAGTCCGATGTGGAAACAGGTAACAGTCTGGCCAATGCCTTCAGAAAACATCCGCTTTATTTCGATTCCCTGTTCT
GTAATCTGGTGGCCGCCGGAGAGGCCGCCGGTATTCTGGACAGCTTGCTGGACAGGCTGGCTACCTATAAGGAAAAGATT
CAGGCCATCAAGGGAAAAATCAAATCGGCTCTGTTTTACCCCATTTCGATAATCGTGGTTGCATTCGTCATTACCGCAGT
GATCATGATATTCGTGATTCCAGCCTTCAAAGAGCTTTTCCAGGGATTTGGTGCCGATCTGCCTGCCCCCACTCTGATGG
TGATGGCGATTTCTGATTTCTTCGTGGATTACTGGTGGGCAATTTTTGGGTGCGTCGGTGGCGGGCTGTACGCATTCTTC
TATACATGGAAGCGCTCTACAGTGATGCAGCATGTGATGGATCGACTGGCGCTGAGGTTGCCGATATTTGGAGAAGTAAT
TCGTAAAGCCACTATCGCTCGCTGGTCTCGCACGCTTTCAACTATGTTTGCTGCGGGTGTCCCTCTGGTCGAAGCGCTCA
ATTCCGTGGCCGGTGCGGCCGGAAATCAGGTGTATTTCGAAGCCACCAGGAATATACAGAATGAAGTCAGCACGGGCAGC
AGTCTGGTAGATGCCATGACAGCCACCAATGTGTTTCCTTCCATGGTGTTGCAGATGGTTTCCATCGGTGAGGAATCAGG
CTCGCTCGATGCCATGCTCAGCAAAATTGCAGATTTTTTCGAGGCAGAAGTGGATGATGCGGTGGAAGCACTCTCCAGTC
TGATGGAGCCGATCATCATGGTTGTGCTGGGGACGCTCATTGGTGGAATGGTCGTTGCCATGTACCTGCCCATCTTTAAA
ATGGGTCAGGTCGTTGGCTGA
ATGGCGACAGTTGCTGCATCAGAAAAGAAAATCAAGGAGTTCAATTTTCTGTGGGAAGGAAAGGATAAGGCTGGCAAGGC
AGTCAAAGGTGAGATGCGTGCTGCCGGTACTGTTGTGGTGACTTCCACACTGCGCCGCCAGGGTATCAGGGTGACGAAAA
TCACCAAAGCCAGAGCTGGTGGAAAAATAACGGATAAGGACATAACGCTGTTTACACGCCAGCTTGCGACGATGATGAAA
TCAGGGGTGCCTTTGCTGCAAGCATTTGATATCGTGGGTAAGGGACACAGCAACCGTGCCGTGGGAAAACTGCTGATGGA
CATCAAGTCCGATGTGGAAACAGGTAACAGTCTGGCCAATGCCTTCAGAAAACATCCGCTTTATTTCGATTCCCTGTTCT
GTAATCTGGTGGCCGCCGGAGAGGCCGCCGGTATTCTGGACAGCTTGCTGGACAGGCTGGCTACCTATAAGGAAAAGATT
CAGGCCATCAAGGGAAAAATCAAATCGGCTCTGTTTTACCCCATTTCGATAATCGTGGTTGCATTCGTCATTACCGCAGT
GATCATGATATTCGTGATTCCAGCCTTCAAAGAGCTTTTCCAGGGATTTGGTGCCGATCTGCCTGCCCCCACTCTGATGG
TGATGGCGATTTCTGATTTCTTCGTGGATTACTGGTGGGCAATTTTTGGGTGCGTCGGTGGCGGGCTGTACGCATTCTTC
TATACATGGAAGCGCTCTACAGTGATGCAGCATGTGATGGATCGACTGGCGCTGAGGTTGCCGATATTTGGAGAAGTAAT
TCGTAAAGCCACTATCGCTCGCTGGTCTCGCACGCTTTCAACTATGTTTGCTGCGGGTGTCCCTCTGGTCGAAGCGCTCA
ATTCCGTGGCCGGTGCGGCCGGAAATCAGGTGTATTTCGAAGCCACCAGGAATATACAGAATGAAGTCAGCACGGGCAGC
AGTCTGGTAGATGCCATGACAGCCACCAATGTGTTTCCTTCCATGGTGTTGCAGATGGTTTCCATCGGTGAGGAATCAGG
CTCGCTCGATGCCATGCTCAGCAAAATTGCAGATTTTTTCGAGGCAGAAGTGGATGATGCGGTGGAAGCACTCTCCAGTC
TGATGGAGCCGATCATCATGGTTGTGCTGGGGACGCTCATTGGTGGAATGGTCGTTGCCATGTACCTGCCCATCTTTAAA
ATGGGTCAGGTCGTTGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Legionella pneumophila strain ERS1305867 |
55.025 |
98.03 |
0.539 |
| pilG | Neisseria gonorrhoeae MS11 |
54.156 |
97.783 |
0.53 |
| pilG | Neisseria meningitidis 44/76-A |
53.904 |
97.783 |
0.527 |
| pilC | Pseudomonas stutzeri DSM 10701 |
51.485 |
99.507 |
0.512 |
| pilC | Acinetobacter baylyi ADP1 |
50.882 |
97.783 |
0.498 |
| pilC | Acinetobacter baumannii D1279779 |
50.754 |
98.03 |
0.498 |
| pilC | Vibrio cholerae strain A1552 |
41.791 |
99.015 |
0.414 |
| pilC | Vibrio campbellii strain DS40M4 |
39.183 |
100 |
0.401 |