Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   CA919_RS06715 Genome accession   NZ_CP021286
Coordinates   1461669..1462010 (+) Length   113 a.a.
NCBI ID   WP_025519545.1    Uniprot ID   A0A128V7G5
Organism   Legionella pneumophila subsp. pneumophila strain Albuquerque     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1456669..1467010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA919_RS06690 acpP 1457499..1457747 (+) 249 WP_003631752.1 acyl carrier protein -
  CA919_RS06695 fabF 1457767..1459005 (+) 1239 WP_011213689.1 beta-ketoacyl-ACP synthase II -
  CA919_RS06700 mltG 1459006..1460004 (+) 999 WP_011213690.1 endolytic transglycosylase MltG -
  CA919_RS06705 tmk 1460004..1460641 (+) 638 Protein_1289 dTMP kinase -
  CA919_RS06710 - 1460638..1461543 (+) 906 WP_011213692.1 DNA polymerase III subunit delta' -
  CA919_RS06715 pilZ 1461669..1462010 (+) 342 WP_025519545.1 PilZ domain-containing protein Machinery gene
  CA919_RS06720 - 1462070..1462858 (+) 789 WP_011213694.1 TatD family hydrolase -
  CA919_RS06725 - 1462970..1464070 (+) 1101 WP_011213695.1 anhydro-N-acetylmuramic acid kinase -
  CA919_RS06730 - 1464126..1465418 (+) 1293 WP_011213696.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=229708 CA919_RS06715 WP_025519545.1 1461669..1462010(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Albuquerque]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229708 CA919_RS06715 WP_025519545.1 1461669..1462010(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Albuquerque]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
GGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTTAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGCCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATCTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A128V7G5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

100

100

1
  pilZ Legionella pneumophila strain ERS1305867

100

100

1

Multiple sequence alignment