Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   CA921_RS06560 Genome accession   NZ_CP021283
Coordinates   1445478..1445819 (+) Length   113 a.a.
NCBI ID   WP_061692035.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain Allentown     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1440478..1450819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA921_RS06535 acpP 1441307..1441555 (+) 249 WP_003631752.1 acyl carrier protein -
  CA921_RS06540 fabF 1441575..1442813 (+) 1239 WP_027266549.1 beta-ketoacyl-ACP synthase II -
  CA921_RS06545 mltG 1442814..1443812 (+) 999 WP_038838265.1 endolytic transglycosylase MltG -
  CA921_RS06550 tmk 1443812..1444450 (+) 639 WP_011215415.1 dTMP kinase -
  CA921_RS06555 - 1444447..1445352 (+) 906 WP_061692034.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  CA921_RS06560 pilZ 1445478..1445819 (+) 342 WP_061692035.1 PilZ domain-containing protein Machinery gene
  CA921_RS06565 - 1445875..1446663 (+) 789 WP_061692036.1 TatD family hydrolase -
  CA921_RS06570 - 1446775..1447875 (+) 1101 WP_061692037.1 anhydro-N-acetylmuramic acid kinase -
  CA921_RS06575 - 1447931..1449223 (+) 1293 WP_061692038.1 MFS transporter -
  CA921_RS06580 - 1449299..1450579 (-) 1281 WP_061692039.1 MFS transporter -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12547.62 Da        Isoelectric Point: 8.2421

>NTDB_id=229667 CA921_RS06560 WP_061692035.1 1445478..1445819(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Allentown]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQLLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=229667 CA921_RS06560 WP_061692035.1 1445478..1445819(+) (pilZ) [Legionella pneumophila subsp. pneumophila strain Allentown]
ATGACCGAAAAACCACAGCTTATAAATTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAGCACGTTTATTCTCTAGGGCAGTTGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(8-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991

Multiple sequence alignment